| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1271 |
|---|
| Symbol | |
|---|
| ID | 5353825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 1284560 |
|---|
| End bp | 1285864 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640810324 |
|---|
| Product | citrate transporter |
|---|
| Protein accession | YP_001346656 |
|---|
| Protein GI | 152987848 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2851] H+/citrate symporter |
|---|
| TIGRFAM ID | [TIGR00784] citrate transporter, CitMHS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCAC TTCTGGGCCT GCTCATGGTG GTGACCTTCA CCTGCCTGAT CATGAGCAAA
CGCTTGTCGC CGATCGTTGC CCTGACCTTG GTGCCGATCG TCTTCGCCGT GATCGGCGGC
TTCGCCCCCG ACCTCGGCAA GTTGATGCTC GATGGGCTGA AAATGGTCGC CCCGTCGGCC
GCGCTGTTGC TGTTCGCCAT CCTGTTCTTC GGCCTGATGA TCGACGCCGG CCTGTTCGAC
CCGTTGATCC GCAAGATACT CAGGCGCGTC AACGGCGATC CCATGAAGAT CGCCGTCGGC
ACCGCGTTGT TGTCCTTGCT GGTGGCGCTC GACGGAGACG GTACCACCAC CTACATGATC
ACCTGCGCCG CCATGCTGCC GCTGTACAGG CGCATCGGCA TGGACCCGAT GATCCTGGCC
ACGCTGTCGA TGCTGTCGCT GAGCATCATG AGCGGACTCA GCCCCTGGGG CGGGCCTGCG
ACCCGCGCCA TCGCCGCCCT TGGCCTGGAT GCCTCGGAAT ACTTCATACC CATGCTGCCG
ACCATGGTCG GCGGCGCCGC CTGGGTTGTA TTCAGCGCGT TCCTGCTTGG CCGCTCCGAA
CGCAGGCGCA TCGGCAACGT CAGGCTCGAA TCCGGTGGTG GCGATTGCTA CATCGAGGCG
ATCCTGGAGG CCACTCCACA CAAGCGTCCG CGCCTGGCCT ACATGAACCT GGCGTTGGTC
ATCGCGGTGA TGGCCGCGCT GGTCCTGGGG GCGATGCACG CCGCGATCCT GTTCATGATC
GGTTTCGTCG CCGCGCTGAT GATCAACTAC CCGGCGCTGG AGCAACAGAA GCAGCGCATC
CAGGCTCACT CCGGCAACGC CATGACGGTG GTGTTGCTGG TATTCGCCGC CGGCATCTTC
GCCGGCATCT TTTCCGGCAC CCGGATGGTC GATGCACTGG CCCAGGCGCT GGTCGGCTGG
ATTCCCGACG CCTGGGGACA CTGGTTCCCG CTGGTGGTGG CGCTGACCAG CATGCCGCTG
ACCTTCGTGC TCTCCAACGA TGCCTACTAC TTCGGCGTGG TGCCGATCCT GGCCAACGCG
GCCGCCGCCT ATGGCATCGA CCCGGTGGAA ATCGCCCGCG CCTCGGTGCT GGGCCAGCCG
GTACACCTGA TGAGTCCGCT GGTGGCCTCG ACCTTGCTGC TGATGGGGAT GGTCGATCGT
GACATCGGCG ATTTCCAGCG AGCGACGGTC AAGTGGGCGG TGCTGACCTC GCTGGTCATC
ACCGCGCTGG CTCTGGCCAC CGGCGCGCTG TCCTTTTTCG TCTGA
|
|---|
| Protein sequence | MLALLGLLMV VTFTCLIMSK RLSPIVALTL VPIVFAVIGG FAPDLGKLML DGLKMVAPSA
ALLLFAILFF GLMIDAGLFD PLIRKILRRV NGDPMKIAVG TALLSLLVAL DGDGTTTYMI
TCAAMLPLYR RIGMDPMILA TLSMLSLSIM SGLSPWGGPA TRAIAALGLD ASEYFIPMLP
TMVGGAAWVV FSAFLLGRSE RRRIGNVRLE SGGGDCYIEA ILEATPHKRP RLAYMNLALV
IAVMAALVLG AMHAAILFMI GFVAALMINY PALEQQKQRI QAHSGNAMTV VLLVFAAGIF
AGIFSGTRMV DALAQALVGW IPDAWGHWFP LVVALTSMPL TFVLSNDAYY FGVVPILANA
AAAYGIDPVE IARASVLGQP VHLMSPLVAS TLLLMGMVDR DIGDFQRATV KWAVLTSLVI
TALALATGAL SFFV
|
|---|
| |