| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1248 |
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| Symbol | |
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| ID | 5354635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 1260032 |
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| End bp | 1263091 |
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| Gene Length | 3060 bp |
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| Protein Length | 1019 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640810301 |
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| Product | hypothetical protein |
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| Protein accession | YP_001346633 |
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| Protein GI | 152988464 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.60494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCAAA GGGACCTGAA GTTCACCTTC GTCGTCGGCG AAGGCAAGCT CGCGTTCGAC
GTCGTCGAGT TCGAGCTGGA GGAAGCGCTC TGCGAGCCTT TCCGCCTGCA CCTGAAGCTG
GCCAGCGACA GGCGCGCCGT CGATTTCAAG CAGGTGCTCG ACCAGCCGGG CACCTTCACC
CTGTGGCAGG ACGGCCGACC CGTCCGCTAC GTCCATGGCC TCGTCAGCCG CTTCACCCAG
GGGGCCTCGG GCTTTCGCCG GACCCGCTAC GAACTGCTGC TGGAGCCGCA GCTGGCGCGC
CTGGAGCTGA GTTCCAACTG GCGCATCTTC CAGAACAAGA GCGTTCCGGA GATCCTCCAG
GCGTTGCTGC AAGAGCACCA GGTGCTCGAC CACGAGCAGC GCATCTACCA CGAGCACCTG
CCGCGCGAAT ACTGCGTGCA GGCCGGCGAC AGCGATCGCT ACCTGCACGA CCGGCTGGCC
TTCGAGGAGG GTCTGGTCTA CTACTTCCGC TTCGACGAGC AGCGCCACAC CCTGGTCTGC
TGCGACCGGC TCTATGTCCA GGAGCGCATC GCCGGCGGCC CGGTGCTGTT CAGCGCCCAG
CCGGAGGGCG ACAACCCGCG GCCGGTGCTG CATGCCTTGC GCTACAGCGA AAACGTCCGC
ACGGCGCGGC AGACCCAGCG CGACTACAGC TTCAAGCGGC CGACCTTCGA CCAGGAACAG
CACCTGCATG GCGAGGCGCT CGAGCACCAG GGCTCGACCT ACGAGCGCTA CGACTACCCC
GGGCGCTACA AGCAGAGTGC CGCGGGCCGG CCCTTCAGCG AAAACCGCCT GCGCGGGCAC
CGGCGCGACG CGCGGGTGGC CTGCGTCAGC GGCGACGACC CGCGGCTGAT CCCGGGCCAC
GCGTTCGAGC TGAGCGGTCA TCCGCGCGCC GACTTCAACG CCTGGTGGCG GCCGGTGCGG
GTGGTCCATC GCGGCACCCA GTATGCCGGC CAGGAGGAAG AGTCCGCCGA CGCTCCCCTG
GGGGTGAGCT ACGACCTGCA CGCCGAACTG GTGCCCGAGG ACGCCGAATG GCGTCCCGAG
CCGCTGCCCC GGCCGCGCAT CGACGGTCCG CAGATCGCCA CGGTGGTCGG CCCGGCAGGG
GAAGAGATCC ATTGCGACGA GTGGGGACGG GTGAAGGTGC GGTTCCCCTG GGATCGCGAG
GGCCGTCCGG ACGAATTCAG CACCTGCTGG ATCCGCGTCG CGCAGAACTG GGCGGGCGCC
GACTGGGGGC ACATGGCGAT CCCGCGGATC GGCCAGGAGG TGATCGTCGA CTACCTGGAC
GGAGACTGCG ACCAGCCGAT CATCACCGGG CGCACCTACC GGGCGACCAA CCGGCCGCCC
TACGCGCTGC CTGACCACAA GATCCTCAGC ACCATCAAGA GCAAGGAGTA CAAGGGCAGC
CGGGCCAACG AGCTGCGCAT CGACGACACC ACGGCGCAGA TCAGTGCGGC GCTGATGAGC
GACCACGGCG CCAGCGCGCT GCACCTGGGC TACCTGACCC ATCCTCGGCC CGAAGGCGGC
CAGCCGCGCG GCGAGGGCTT CGAACTGCGC ACAGACGAAC ATGGCGCGGT GCGTGCGGCC
AGGGGCCTGC TGCTGAGCGC CGAGGAACAG CTCAGGGCCG GTGCCGGCCA TCTCGAGCGT
GGCGTGGTGG TGCAGGTGCT GGAAGCGGCG CTGGAACTGG CCCGCGAGCT GGGCGACTAC
GCCGGGGAGC ACCAGGGCGT GGGGCACGAT GCGGCGCCGC AGCAGAGCCT CCAGGAAGCC
GTGCGCGACC TCGGCCTTGG CGCCAACGAC GAACCCGGGC AGGGCGTCGG CGGCAAGCCG
GCGATCGCCC TGAGCGGCCC GGCGGGGATC GCCGCGGCGA CGCCGGCGAG CCTGACCCTG
GCCGCCGGCG AGCACGTCGA CAGCGTGGCC CGGCAGAACC AGCAGGTGAC CGCCGGGCAG
AAGGTGGTGG TCAACGCCGG CAGCGACATC GGCCTGTTCG CCCAGGGCGG CGAACTGCGC
CAGATCGCCC ACCAGGGGCC GATGCTGCTG CAGGCGCAGA AGAACGATAT CCGCCTGGAG
GCCGAGCAGA GCGTGGAGGT CAGCGCCAGC CAGCAGCACG TGCTGGTCAC GGCGAAGGAG
CACATCACCC TGATGTGCGG CGGCGCCTAC CTGACCCTCA AGGGCGGCAA CATCGAGCTG
GGCATGCCCG GCAACTTCGT GGTCAAGGCG GCGAAGCACA GTCATGTCGG TGCGGCCAGC
CTGGAAGCCG AGCTGCCGCA GTTCGAGGTG GGCGAGACGC AGCGGCGGTT CGTCCTCAAG
CAACTGGACG GGCAGACGGC CATGCCCAAC GTGCCTTATA CCATCACCAT GGCCAACGGC
GAGGTCATCG AGGGCGTCAC CGACGCCGAA GGCGCCACCC GGTTGCTGCA GAAGGATGCG
ATGAACATCG CCAAGGTCGA TATGAAACAC GCGAAATCGC CCGCCTCCGC AGTTGCCGGG
ATAACGGCGG CGGTTGGCGC GGCGGTTGCC CTCGGCAAGC TCCTGGGTGG CCCCGACGCC
GAGGCCGGAC GTGCTCTCAG CGAAGGGGAA ATCAGCCTGG CGAAAGGCGT ATTCGGCGAT
TCCATCGACT ATTCCACGGT CCGCCTGCGC GACGAGGACT ATGTCCCCTG GCAGGGCAAG
GACTACGTGA TGGCGCCGAA CGGCCACATC TACTTCGGCG AGGAGTTGCG CGGCGTGGCG
GACTGGAGCC TGGAGAGCCT GCAGCGCCAG GGCCTGTTCA TCCACGAAAT GACCCATGTC
TGGCAGCACC AGCATGGCGT CAACGTCCTT ATGGTGGGGG CCTACCAGCA AGCCAGGCAG
TTTCTCCTGG GCGACCAGTA CGCCTACCGG TTGGAGCCGG GAAAGACGTT GAAGGACTAC
AACATCGAAC AGCAGGGAGA CATCGTTCGA GATTATTTCC TCGAGAAGAA CGAGTTCGGG
GAAGCCTCTG CGAACAGCAG GTTCGCTGGC GTACTGAAAA ACTTCCCAAC GGGATACTGA
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| Protein sequence | MRQRDLKFTF VVGEGKLAFD VVEFELEEAL CEPFRLHLKL ASDRRAVDFK QVLDQPGTFT
LWQDGRPVRY VHGLVSRFTQ GASGFRRTRY ELLLEPQLAR LELSSNWRIF QNKSVPEILQ
ALLQEHQVLD HEQRIYHEHL PREYCVQAGD SDRYLHDRLA FEEGLVYYFR FDEQRHTLVC
CDRLYVQERI AGGPVLFSAQ PEGDNPRPVL HALRYSENVR TARQTQRDYS FKRPTFDQEQ
HLHGEALEHQ GSTYERYDYP GRYKQSAAGR PFSENRLRGH RRDARVACVS GDDPRLIPGH
AFELSGHPRA DFNAWWRPVR VVHRGTQYAG QEEESADAPL GVSYDLHAEL VPEDAEWRPE
PLPRPRIDGP QIATVVGPAG EEIHCDEWGR VKVRFPWDRE GRPDEFSTCW IRVAQNWAGA
DWGHMAIPRI GQEVIVDYLD GDCDQPIITG RTYRATNRPP YALPDHKILS TIKSKEYKGS
RANELRIDDT TAQISAALMS DHGASALHLG YLTHPRPEGG QPRGEGFELR TDEHGAVRAA
RGLLLSAEEQ LRAGAGHLER GVVVQVLEAA LELARELGDY AGEHQGVGHD AAPQQSLQEA
VRDLGLGAND EPGQGVGGKP AIALSGPAGI AAATPASLTL AAGEHVDSVA RQNQQVTAGQ
KVVVNAGSDI GLFAQGGELR QIAHQGPMLL QAQKNDIRLE AEQSVEVSAS QQHVLVTAKE
HITLMCGGAY LTLKGGNIEL GMPGNFVVKA AKHSHVGAAS LEAELPQFEV GETQRRFVLK
QLDGQTAMPN VPYTITMANG EVIEGVTDAE GATRLLQKDA MNIAKVDMKH AKSPASAVAG
ITAAVGAAVA LGKLLGGPDA EAGRALSEGE ISLAKGVFGD SIDYSTVRLR DEDYVPWQGK
DYVMAPNGHI YFGEELRGVA DWSLESLQRQ GLFIHEMTHV WQHQHGVNVL MVGAYQQARQ
FLLGDQYAYR LEPGKTLKDY NIEQQGDIVR DYFLEKNEFG EASANSRFAG VLKNFPTGY
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