| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1245 |
|---|
| Symbol | |
|---|
| ID | 5354352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 1256002 |
|---|
| End bp | 1257900 |
|---|
| Gene Length | 1899 bp |
|---|
| Protein Length | 632 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640810298 |
|---|
| Product | AMP-binding domain protein |
|---|
| Protein accession | YP_001346630 |
|---|
| Protein GI | 152985889 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.988132 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCGT CCCAACCGAT CGCCGGGCTG CGCGATATCG AAGCCCTGGA ACGCGTGCCG
CTGGAGCAGC GCGACCTGCC GTCCAGCACC TACGAACTGC TGCGACGCTC GGCCCAGCGC
CATGGCCAGC GCATCGCGCT GAGCTGCCTG CTGCACGGCA GCGCCGCCGA GGAGCCGCTG
CGGATCAGCT ACGCCGAGCT GTTCGCCCGC GTCACCCAGA CCGCCAACGC CCTGCACCGG
CTGGGCCTGG AGAGCGACCA GGCGGTGTCC TTCCTGCTGC CGAACCTGCC GCAGACCCAC
TACGTGATCT GGGGCGGCGA GGCGGCCGGG ATCGTCAACG CGATCAACCC GCTGCTGGAG
CCGGAGCACA TCGCCGAGTT GGTCCGCGCC TCCAACACCC GGGTGCTGGT GACCCTGGCG
CCGTTCCCCG GCAGCGACCT GTGGCAGAAG GTCGCCGGCC TGCGCGCGCA GTTGCCGGAG
TTGTACGCGA TCGTCGTGGT CGATCCGGCC AACCTGTTGC CGGCGCCGCA GCGCGAGGCG
CTCAAGGCCC AGCGCGGGCC GCTGCCGGAG GGCGTGCTGG ATTTCGATGC GCTGATTGCC
GATTGCCCGG CAGACCGCCT GGAAAGCGGG CGGGTGATCC ATCCGGACGA CGTCGCCTCC
TATTTCCACA CCGGCGGTAC CACCGGTACC CCGAAGCTGG CCCCGCACAG CCACTTCAAC
GAGGTGGCGA TGGCCGAGAT CATGGGCCTG AACGCCGACT ACGGGGTGGA CGACGTGCTG
CTCTGCGGCC TGCCGCTGTT CCATGTCAAC GGCGTGATGG TCACCGGCCT GGCGCCGTTC
CATCGCGGCG CCCAGGTGCT CCTGGCCGGA CCTCAGGGCT ACCGCAATCC GACCCTGATC
CAGGACTTCT GGAAGCTGGT GGAGCGCTAC CGGGTCACCA GTTTCAGCGG CGTGCCGACC
ATCTACGCCG CACTGCTACA GGTGCCCAGC GACGGTCGCG ACCTGTCCAG CCTGCGCTTC
GCCCTGTGCG GCGCGGCACC GATGCCGGTG GAGCTGATCC GCCAGTTCGA GGCGCGCACC
GGGCTCAAGG TGATCGAAGG TTATGGACTC ACCGAAGGCA CCTGCGGCAC CAGCTGCAAC
CCGCGCGGCG GTGAGCGCCG GCCGGGCTCG ATCGGCCTGC GCCTGCCGTA CTGCCAGGTG
AAGGTCGCCG TGCTCGACGG CGACGGCCGT TACCTGCGCG ATGCCGCGCC GAACGAGGCG
GGCAACCTCT GCCTGAAGGG CCCGACGGTG TTCAAGGGCT ACCTGCAGCA GGAGAAGAAC
CGCGACATCT GGGTCGACGG TGACTGGTTC AACACCGGCG ATCTCGGCCG CATCGACGAG
GACGGCTATA TCTGGCTCAC CGGGCGCAGC AAGGACCTGA TCATCCGTGG CGGCCACAAC
ATCGACCCGC AGATGATCGA AGAGGCGCTG CACAAGCACC CGGCCGTGGC CCTGGCGGCG
GCGGTGGGCA AGCCGGATGC GAGGGCCGGC GAGCTGCCGG TGGTATACGT CCAGCTCAAG
CCTGGCGCCC GTGCCAGCGA GGAGGAACTG CTGGAACATG CCGGCCGCCA TGTGCCGGAA
CGGGCGGCGG TGCCCAAGGA TGTCTGGCTG ATCGAGAGCA TCCCGCTCAC CGCGGTGGGC
AAGACCTTCA AGCCGGCGCT GCGCCTGGAC GCGATCCGCC GGGTGCTGGA GGAAGAGGGG
CGGAAGATCG CGGCGGACAT TCGCGTGGAC GTCGTCACCG ACGAGCGCCA CGGCCAGCTT
GCCCACCTGC ACGTTCCCGG CCTCGACGAG ACACGCCGGG CGGCGCTGCA GGAGATGCTC
GGCGGCTACG CGCTGGCCTA CCGGCTGCAC GCCGGCTGA
|
|---|
| Protein sequence | MNPSQPIAGL RDIEALERVP LEQRDLPSST YELLRRSAQR HGQRIALSCL LHGSAAEEPL
RISYAELFAR VTQTANALHR LGLESDQAVS FLLPNLPQTH YVIWGGEAAG IVNAINPLLE
PEHIAELVRA SNTRVLVTLA PFPGSDLWQK VAGLRAQLPE LYAIVVVDPA NLLPAPQREA
LKAQRGPLPE GVLDFDALIA DCPADRLESG RVIHPDDVAS YFHTGGTTGT PKLAPHSHFN
EVAMAEIMGL NADYGVDDVL LCGLPLFHVN GVMVTGLAPF HRGAQVLLAG PQGYRNPTLI
QDFWKLVERY RVTSFSGVPT IYAALLQVPS DGRDLSSLRF ALCGAAPMPV ELIRQFEART
GLKVIEGYGL TEGTCGTSCN PRGGERRPGS IGLRLPYCQV KVAVLDGDGR YLRDAAPNEA
GNLCLKGPTV FKGYLQQEKN RDIWVDGDWF NTGDLGRIDE DGYIWLTGRS KDLIIRGGHN
IDPQMIEEAL HKHPAVALAA AVGKPDARAG ELPVVYVQLK PGARASEEEL LEHAGRHVPE
RAAVPKDVWL IESIPLTAVG KTFKPALRLD AIRRVLEEEG RKIAADIRVD VVTDERHGQL
AHLHVPGLDE TRRAALQEML GGYALAYRLH AG
|
|---|
| |