| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1240 |
|---|
| Symbol | |
|---|
| ID | 5358051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 1250411 |
|---|
| End bp | 1251202 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640810293 |
|---|
| Product | amino acid binding protein |
|---|
| Protein accession | YP_001346625 |
|---|
| Protein GI | 152989615 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGT CGCTGAACAC CAAGAACCTG CTGGGAGGCC TGCTGCTCGG CGTGCTCGCC
AGCGGATCCG CCGTCGCCGC CGATGGCAAC CTGCGGATCG GCATCGAGGC CGCCTACCCG
CCGTTTTCCT TCAAGACCCC CGAAGGCGAG CTGGCCGGCT TCGACTACGA CATCGGCAAT
GCGCTGTGCG CGCAGATGCA GGTGAAGTGC CAGTGGATCG AGCAGGAGTA CGACGGCCTG
ATCCCCTCGC TGAAAGTCCG CAAGATCGAC GCCGCGCTGT CTTCCATCAC CATCACCGAG
GAACGCCGGC GCTCGGTGGA CTTCACCCGC AAGTACTACT TCACCCCGGG CCGCCTGGTG
ATGAAAGAGG GCGCCCAGCT CGACGACAGC TTCAGCCAGC TGGCCGGCAA GCGTATCGGC
GTGCAGCGCG GCGCCACCGC CGACCGCTTC GCCAGCGCGG TGCTGGCCAA GGCCGGCGCC
GAAGTGGTGC GCTACACCAG CCAGGACGAG ATCTACCTGG ACCTGGTGGC CGGCCGCCTG
GACGCCACCT TCGCCGATTC CATCCCGCTG CAGACCGGCT TCCTCGACAC CCCGCGCGGC
AAGGGCTACG CCTTCGTCGG GCCGGAGTTC AAGGACCCGA AACACTTCGG CGAGGGCGCC
GGGATCGCGG TGCGCAAGGG CGATGCCGAA CTGCTCGGCA AGCTCAACGC GGCGATCGAC
GCGATCCGTG CCGACGGCAC CTACAAGCGC ATCGAGAGCA AGTACTTCAA GACCGACATC
TACGGCGACT GA
|
|---|
| Protein sequence | MIKSLNTKNL LGGLLLGVLA SGSAVAADGN LRIGIEAAYP PFSFKTPEGE LAGFDYDIGN
ALCAQMQVKC QWIEQEYDGL IPSLKVRKID AALSSITITE ERRRSVDFTR KYYFTPGRLV
MKEGAQLDDS FSQLAGKRIG VQRGATADRF ASAVLAKAGA EVVRYTSQDE IYLDLVAGRL
DATFADSIPL QTGFLDTPRG KGYAFVGPEF KDPKHFGEGA GIAVRKGDAE LLGKLNAAID
AIRADGTYKR IESKYFKTDI YGD
|
|---|
| |