Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1212 |
Symbol | |
ID | 5358031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 1221689 |
End bp | 1223884 |
Gene Length | 2196 bp |
Protein Length | 731 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640810265 |
Product | hypothetical protein |
Protein accession | YP_001346597 |
Protein GI | 152986669 |
COG category | [S] Function unknown |
COG ID | [COG1289] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0420333 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGGGC GCCCCGGCAG CCTCGCCCTG CCCAGCCGCG ACGAGTGGCG GCGCGCCCTG GCCGAGTGGG CGCGCAGCGA CGGGGCGACC TGGATCTATG TGTTCAAGGT GCTCTGCGCG GCCTTCCTGA CCCTCTGGCT GGCGATGCGC CTGGAGTTGC CGCAGCCGAG CACGGCGACC ATCACCGTGT TCATCGTCAT GCAACCGCAG AGCGGTCAGG TATTCGCCAA GAGCTTCTAC CGCATCCTCG GCACCCTGGT CGGGCTCAGC GTGATGGTCA CCCTGATCGC CCTGTTCGCC CAGGAGCGGG TGCTGTTCCT GCTCAGCTCG GCGATCTGGA TCGGTCTCTG CACCGCCGGT GCCGCGCGCT ACCGTGACTT CCGTTCGTAC GCCTGCGTGC TCGCCGGCTA CACCGCGACG CTGATCGGCA TCCCCGCCAC CAGTCACCCG GAAGGCGCGT TCATGCAGGC GATCTGGCGG GTGCTGGAGA TCAGCCTGGC GATCCTCTGC TCGGGCGTGG TCAGCGCGGT GATCATGCCG CAGACCACCA GCGCGGCGAT GCGCAACGCG CTGTACGTGC GCTTCGGCCT GTTCGCCGCG TTCGTCCTCG ACAGCCTGCG CGGGGTCGGC GGGCGCGAGC GCTTCGAGAG CAGCAACGTG GCCTTCGCCG CCCAGGCCGT GGGCCTGGAG ACGATGCGCG CGGCGAGCGC CTTCGAGGAT CCGCACATGC GCCTGCGCAA TGGCCGGTTG ATTCGCCTGA GCGGCGAGTT CATGGCCATG AATACCCGTT TCCACGCCCT CCACCAGTTG CTCGAACGCC TGCGTGCGCA AGGCTCCAAG CCAGTGCTGG AAGCGTTCGA GCCGTGCCTG GAGGAAATCA CCGGGTTGCT TGAGGAAATC CGTGGCCGCG CCGTCACCGA CCATGACGCC GAACGCTTCG CCGGGCGCCT CGCCGACTGC CGCGAACGCC TGATGGCGCG CATCCGCCAG GCGCGCGGCG AACTGCTGGC GCGGGAGCCC GGGGAAGAGG CGCGGCTGGA CTTCAACACC GCCGCCGAGC TGCTCTATCG CTTCGCCGAG GAAATGCACG ACTACGCCCT GACCCACGCC TCGCTGGCCG CCCACCGCCA CGAGCGCGAG CAGTGGAAGG ACGCCTTCAC CGCCAAGGCC AACGCGGTGG CGGCGGCGGT GGCGGGGGTG CGCACCGGGC TGATGATCCT GCTGTTCGGC TGCTTCTGGA TCTACAGCAC CTGGCCCAGC GGCGGCACCT TCGCCCTCAA CGCGGTGGCG GTCTCGGCGC TGGCCTCGGC GGCGCCGAAT CCGAAGAAGA TCGCCATGCA GATGGCTATC GGCACCATGG GCGCGGCGGT ACTGGGTTTC AGCGAGATGT TCTTCGTCTA CCCGCACATC GACGGTTTCC CGCTGCTGTG CCTGGTGCTG GCGCCGGTAT TCGCCCTCGG CGCGTTCATT TCCTCGCGGC CGCAGTGGGC CGGCTACGGC CTCGGCCTGC TGGTGTTCTT CTGCTTCGGT TCGGTGCCGG CGAACCTGAC CGTCTACGAC CCGGCCCACG TGATCAACGA GTACATCGCC CTGATCCTCT CGATGCTGCT CTCGGCCGCC GCCGCCGCGG TGATCCTGCC GCCCAACAGC GCCTGGCTGT GGAAGCGCCT GGAGCGCGAC CTGCGGATGC GCGTGGTGTT CGCCATCAGC GGCAAGAGCC GGGGTCTCGG CTCGGCGTTC GAAAGCGGCA CCCGCGACCT GCTGAACCAG GCCTACGGGG TCGCCGCCGG GCGCCCGGAC GTGCAGCGTG GCCTGCTGCG CTGGATGTTC CTGGTGCTGG AGGTCGGCCA CGCGATCATC GAACTGCGTC GCGAGCAGGA GCGTCTGCCG GACGAGCCCT GCTACGCCGA GTCCATGCCC TGGCGCCAGG CGATCCGTGC CATGGGCCGC GCGCTGATCC GGCTGTTCGT GCGCCCCGGC GAGGAGAACC TGGAACGCGC CCTGGCGGCC GTCGACCAGG CGATCCACGC GGCAAGGCAC ACCGACGAAC CCTGTGCGCC GCACTTCGAC AGCTCGCCGC TGCGGCGGGT GCGCAGCTAC TTGCACTTCA TCCGTTCTTC CTTGCTCGCG CCGACCTCGC CGCTGACCGA ACTGGCCGGC CGGACGAGTG GCCAGGGGAC TGTCCATGCC GCGTGA
|
Protein sequence | MSGRPGSLAL PSRDEWRRAL AEWARSDGAT WIYVFKVLCA AFLTLWLAMR LELPQPSTAT ITVFIVMQPQ SGQVFAKSFY RILGTLVGLS VMVTLIALFA QERVLFLLSS AIWIGLCTAG AARYRDFRSY ACVLAGYTAT LIGIPATSHP EGAFMQAIWR VLEISLAILC SGVVSAVIMP QTTSAAMRNA LYVRFGLFAA FVLDSLRGVG GRERFESSNV AFAAQAVGLE TMRAASAFED PHMRLRNGRL IRLSGEFMAM NTRFHALHQL LERLRAQGSK PVLEAFEPCL EEITGLLEEI RGRAVTDHDA ERFAGRLADC RERLMARIRQ ARGELLAREP GEEARLDFNT AAELLYRFAE EMHDYALTHA SLAAHRHERE QWKDAFTAKA NAVAAAVAGV RTGLMILLFG CFWIYSTWPS GGTFALNAVA VSALASAAPN PKKIAMQMAI GTMGAAVLGF SEMFFVYPHI DGFPLLCLVL APVFALGAFI SSRPQWAGYG LGLLVFFCFG SVPANLTVYD PAHVINEYIA LILSMLLSAA AAAVILPPNS AWLWKRLERD LRMRVVFAIS GKSRGLGSAF ESGTRDLLNQ AYGVAAGRPD VQRGLLRWMF LVLEVGHAII ELRREQERLP DEPCYAESMP WRQAIRAMGR ALIRLFVRPG EENLERALAA VDQAIHAARH TDEPCAPHFD SSPLRRVRSY LHFIRSSLLA PTSPLTELAG RTSGQGTVHA A
|
| |