Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1201 |
Symbol | |
ID | 5354688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 1207091 |
End bp | 1209433 |
Gene Length | 2343 bp |
Protein Length | 780 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640810254 |
Product | PKD domain-containing protein |
Protein accession | YP_001346586 |
Protein GI | 152986656 |
COG category | [R] General function prediction only |
COG ID | [COG2374] Predicted extracellular nuclease |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCACCCCT TGCGTAACGC CGCCCTGCTG GGCGGCCTGG CCCTGCTGGG CCTGCCGGTG GCGAACGCCG CCGAGCTGAT CATCTCCGAG TACGTCGAAG GCAGCGGCAA CAACAAGGCG CTGGAGTTCT ACAACAGCGG CAGCCAGGTC CTCGATCTCT CCGCCTACCG CGTCGAGTTC TACTTCAACG GCGCCAGCGC GGCGGGCCGC AGCATCGAGC TGAGCGGCAG CCTGGCGCCG GGCAGGACCT TCGTCCTCGC CAACGGCGTG GCCGATCCGG CGCTGCTGGC CCTGGCCAGC CAGCGCGTGG AAGGCAGCTG GTTCAACGGC AACGACGCGG TGCTGCTGCG CCGACGCGAT GGCGAAGTCC TCGACAGCCT CGGCCAGGTC GGCGTCAATC CCGGCACCGC CTGGGGCGGC GGTGACGTCC AGACCCTCGA CCGGACCCTG GTGCGCAAGA CCGATATCCG CGACGGCGAC AGCGATCCCG GCGATGCCTT CGATCCGGCG GCGCAATGGC TGGGCTACCC GCGCGACACC TTCGCCCATC TCGGCCAGCA CGGTGATGGC CAGCCGGGTG GCGGCGAGGA GGCCGGCCTG CGACCGATCC ACGAGGTGCA GGGCGCCGGC GCCGAAAGTC CGCTGGTGAA CCAGCGGGTC GCCATCGAGG GCGTGGTGGT CGGCGACTTC CAGAACGCCA GCGAGTTGAA GGGCTTCTAC GTGCAGCAGG AAGACGCCAC GGTGGACGGC GATCCGGCCA CCTCCGAAGG CCTCTTCGTC TACGACGGCG GCAACGGCAG CGACGTCAAG CTCGGCGACC GCGTCCGGGT GAGCGGCCAG GTCCGCGAGT TCAACGGCCT CACCGAGCTG GTCGGACCGC TGCAGGTCAG CGTCCTGGCG AGCGGCGTGG CCCTGCCGTC GCCGGCCGGC ATCAGCCTGC CGCTGGCCAG CGCCGACGCG CTGGAACGCT ATGAGGGCAT GCGCGTGCAG ATCCGCCAGG CGCTCACCGT CAACGAGGTC TACAACCTCG GGCGCTACGG CGAGGTCCTG CTGTCCTCAG GCGGTCGCCG GATGACTCCG ACCAACGTGG TGGCGCCCGG TGAACAGGCC AGGGCCATGC AGGCACGCAA CGACCTGGAC CGGATCATCC TCGACGACGG CCGCAGCGGG CAGAATCCCG ACCCGATCCG CTATCCGGCG CCCGGGCTGA GCGCCTACAA CAGCCTGCGC GTGGGCGACC GCACCAGCGC CATCGACGGC GTGCTCGACT ACTCGGCCGG CAGCTACCGC ATCCAGCCGC TGCAAACCCC GGTATTCGAG GCGGCCAACC CGCGCCCGGC CCAGCCGGTG GTGGAAGGAC GCCTGCGGGT GGCCAGCTTC AACGTGCTCA ACTACTTCAA CGGCGACGGC AAGGGCGGCG GCTTCCCCAC CTCGCGCGGG GCCAGCACGG CGGAAGAGTT CCAGCGGCAG AAGGCGAAGA TCGTCGCCGC GATCCTCGCC TCGAAGGCGG ACATCGTCGG CCTGATGGAG ATCGAGAACG ACGGCTACGG CGAGTTCGCC GCCATCGCCG ACCTGGTCGA TGGCCTCAAC GCCGGCCTGC CCCAGGGGCA GCGCTACGCC TTCGTCAATC CGAACCGGAC TAAGCTGGGC AGCGACGAGA TCGCCGTCGG CCTGATCTAC CGCAGCGACA GGGTACGCAC CTACGGTGCC GCGGCAGTGC TCGATCGCAC GGTGAACCCG GAGTTCGATG ACAGCAAGAA CCGCCCGACC CTGGCCCAGA CCTTCCAGGA GATCACCGGC GGCGAGCGCC TGACCATCGC GGTCAATCAC CTGAAGTCGA AGGGCTCGGC CTGCGACGGC GACCCGGACA CCGGCGATGG CCAGGGCAAC TGCAACCTGA CCCGTGCGCG CGCCGCCCAG GCCCTGGTGG ACTGGCTGGC GAGCGATCCG ACCGCGGCGA AGGACCCGGA CTACCTGATC ATCGGCGACC TCAACTCCTA TGCCAAGGAA GACCCGGTGA ACGTCATCCG CGCCGCCGGC TACACCGACC TGGTGGCGCG TCAGGCCGGG GCCGGGAAGG GCTACTCCTA CGTGTTCTCC GGGCAGTCCG GCTATCTCGA CCATGCCTTG GCCAATGCCA GCCTGGCGCG CCAGGTGCGC GGCGCGGTGG AGTGGCACAT CAACGCCGAC GAGCCGCGGG TGCTGGACTA CAACCTGGAG TTCAAGACGC CGCGGCAGCA GGACAGCCTG TACAGCGCCG AGCCGTATCG TGCGTCGGAC CACGACCCGG TGGTGATCGG CATCGACCTG CGGCGGGTGG CGATGAAGCG CCACCGGCGC TGA
|
Protein sequence | MHPLRNAALL GGLALLGLPV ANAAELIISE YVEGSGNNKA LEFYNSGSQV LDLSAYRVEF YFNGASAAGR SIELSGSLAP GRTFVLANGV ADPALLALAS QRVEGSWFNG NDAVLLRRRD GEVLDSLGQV GVNPGTAWGG GDVQTLDRTL VRKTDIRDGD SDPGDAFDPA AQWLGYPRDT FAHLGQHGDG QPGGGEEAGL RPIHEVQGAG AESPLVNQRV AIEGVVVGDF QNASELKGFY VQQEDATVDG DPATSEGLFV YDGGNGSDVK LGDRVRVSGQ VREFNGLTEL VGPLQVSVLA SGVALPSPAG ISLPLASADA LERYEGMRVQ IRQALTVNEV YNLGRYGEVL LSSGGRRMTP TNVVAPGEQA RAMQARNDLD RIILDDGRSG QNPDPIRYPA PGLSAYNSLR VGDRTSAIDG VLDYSAGSYR IQPLQTPVFE AANPRPAQPV VEGRLRVASF NVLNYFNGDG KGGGFPTSRG ASTAEEFQRQ KAKIVAAILA SKADIVGLME IENDGYGEFA AIADLVDGLN AGLPQGQRYA FVNPNRTKLG SDEIAVGLIY RSDRVRTYGA AAVLDRTVNP EFDDSKNRPT LAQTFQEITG GERLTIAVNH LKSKGSACDG DPDTGDGQGN CNLTRARAAQ ALVDWLASDP TAAKDPDYLI IGDLNSYAKE DPVNVIRAAG YTDLVARQAG AGKGYSYVFS GQSGYLDHAL ANASLARQVR GAVEWHINAD EPRVLDYNLE FKTPRQQDSL YSAEPYRASD HDPVVIGIDL RRVAMKRHRR
|
| |