Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1183 |
Symbol | |
ID | 5356612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 1184713 |
End bp | 1186395 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640810236 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | YP_001346568 |
Protein GI | 152988756 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.439091 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAAGA CCCGTCTCAT CCCGGCCGCC GCCGGCGCTT ATCAGTATCC GTTGCTGATC AAGAGCCTGA TGCTTTCCGG CAGTCGTTAC GAAAAGAGTC ATGAAATCGT CTACCGCGAC CAGGTGCGCT ACAGCTACGC CACCTTCAAC GAGCGTGTCG CGCGACTGGC CAACGTGCTC AGCGAAGCCG GGGTAAGAGC CGGCGACACG GTGGCGGTGA TGGACTGGGA CAGCCATCGC TACCTGGAAT GCATGTTCGC CATCCCGATG ATCGGGGCGG TGCTGCATAC CATCAACATC CGTCTCTCCC CGGAACAGAT CCTCTACACC ATGAATCACG CCGAGGATCG TTTCGTGCTG GTCAACAGCG AGTTCGTCCC GCTCTACCAG GCAGTGGCGG GGCAGCTGGC CACGGTGGAG CGGACCATCC TGCTCAGCGA TGGCGCGGAA AAGAGCGCCG AACTGCCCGG GCTGGTCGGC GAATACGAGT CGCTGCTGGC CGCGGCCAGC CCGCGCTACG ACTTTCCCGA TTTCGACGAG AACTCCATAG CCACCACCTT CTACACCACC GGCACCACCG GCAATCCGAA AGGGGTGTAT TTCAGCCACC GGCAACTGGT CCTGCACACC CTGGCGATGG CCTCGACCAT CGGCAGCCTG GACAGCATCC GCCTGCTCGG CACCAGCGAT GTGTACATGC CGATCACCCC GATGTTCCAC GTCCACGCCT GGGGCACTCC GTACGTGGCG ACCATGCTCG GGGTCAAGCA GGTCTACCCC GGGCGTTACG ATCCGGAACT GCTGGTCGAA CTGTGGAAGC GCGAGAAGGT CACCTTCTCC CACTGCGTGC CGACCATCCT GCAGATGGTG ATGAACGCCA GGGCCGCCCA GGGCGTGGAT TTCAAGGGCT GGAAGGTGAT CATCGGCGGC AGCGCACTGA ACCGCTCGCT CTACGAGGCC GCCAAGGCGC GCGGTATCCA GCTGACCGCC GCCTACGGCA TGTCGGAGAC CTGCCCGCTG ATCTCCTGCG CCTACCTCAA CGACGAACTG CTGGCCGGAA GCGAGGACGA GCGCACCACC TACCGGATCA AGGCCGGCGT GCCGGTACCA CTGGTGGATG CGGCGATCAT GGACGAGCAG GGCCGCTTCC TGCCGGCCGA TGGCGAGTCC CAGGGCGAGC TGGTGTTGCG CTCGCCATGG CTGACCCAGG GGTATTTCCG CGAACCCGAG CGCGGCGAGG AACTCTGGCG TGGCGGCTGG ATGCACACCG GTGACGTGGC GACCCTGGAC GGCATGGGCT TCATCGAGAT CCGCGACCGC ATCAAGGATG TGATCAAGAC CGGCGGCGAG TGGCTGTCCT CCCTGGAGCT GGAAGACCTG ATCAGCCGCC ATCCGGCGGT GCGCGAGGTG GCGGTGGTCG GCGTGCCCGA CCCGCAGTGG GGCGAGCGAC CGTTCGCCCT GCTGGTGGTG CGCGAGGGTC AGGAACTCGA CGCGCGCGGG CTGAAGGAGC ACCTCAAGCC TTTCGTCGAG CAGGGCAACA TCAACAAGTG GGCGATTCCC TCGCAGATCG CGGTTGTTAC CGATATTCCC AAGACCAGCG TCGGCAAGCT GGACAAGAAG CGCATCCGCA TCGAGATCGC CCAGTGGCAG GAAGCCGGCA GCGCCTTCCT GTCGACCGTC TGA
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Protein sequence | MLKTRLIPAA AGAYQYPLLI KSLMLSGSRY EKSHEIVYRD QVRYSYATFN ERVARLANVL SEAGVRAGDT VAVMDWDSHR YLECMFAIPM IGAVLHTINI RLSPEQILYT MNHAEDRFVL VNSEFVPLYQ AVAGQLATVE RTILLSDGAE KSAELPGLVG EYESLLAAAS PRYDFPDFDE NSIATTFYTT GTTGNPKGVY FSHRQLVLHT LAMASTIGSL DSIRLLGTSD VYMPITPMFH VHAWGTPYVA TMLGVKQVYP GRYDPELLVE LWKREKVTFS HCVPTILQMV MNARAAQGVD FKGWKVIIGG SALNRSLYEA AKARGIQLTA AYGMSETCPL ISCAYLNDEL LAGSEDERTT YRIKAGVPVP LVDAAIMDEQ GRFLPADGES QGELVLRSPW LTQGYFREPE RGEELWRGGW MHTGDVATLD GMGFIEIRDR IKDVIKTGGE WLSSLELEDL ISRHPAVREV AVVGVPDPQW GERPFALLVV REGQELDARG LKEHLKPFVE QGNINKWAIP SQIAVVTDIP KTSVGKLDKK RIRIEIAQWQ EAGSAFLSTV
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