Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1180 |
Symbol | |
ID | 5358287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 1181228 |
End bp | 1182016 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640810233 |
Product | putative transcriptional regulator |
Protein accession | YP_001346565 |
Protein GI | 152984860 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGATCG AGCACCGCCC GGACGGCCTG CTGGCCGCCA TCTCCCTCGA CTTCCCCGAC GGCCACCAGC TGGGGCGGCA TTTCCACCCG CAGGCGCAGT TCCTCTACGC CGCTCGCGGC CTGATGCGCC TGGCCACCCA CCACGGCGCC TGGGTGATCC CGCCGACCCG CGCGGTATGG ATTCCGCCCC GGGTGGAGCA CGAGATATTC ATGTCCGGCG AGGTGCACAT GCGCACCCTG TTCATCGAGC AACCCGAAAC ACCGACACCG CTAAGCGACT GTTGCGTACT GGCGGTGACG CCGCTGCTGC GGGAAATGAT CCTGCGCGCC ATCCACCTCG AGAGCCAGCC GCGCCTGGAC GACTTCCGCC AGCGCCTGCA GGGGCTGATC CTCAGCGAGA TCGCCAACCT CGAACGGATG CCGCTGTACC TGCCGATGCC CCGCGACCGC CGCCTGCAGG CGATCTGCCA GGCATTGCTG AAACAGCCGG AGCTGGGGCT GACCCTCGAT GACTGGGGCC TGCGGGTCGG CGCCAGCTCG CGCACCCTGG CGCGGCTGTT CGCCCAGGAA CTGCAGATGA GCTTCCATGA GTGGCGCCAG CAACTGCGCC TGACCGAAGC CCTGCCGCGC CTGCTGGCCG GCGACAGCGT GCAGGTGGTC GCCCGCGACC TCGGCTACGG CAGTACGCGG GCCTTCAGCA GCATGTTCCG CCGCTTGCTC GGCGAGACCC CGCGCGACTA CCTGGGGCGA CTGGAGCAAC TGGCACGGGT CAGAGGCCGC GAGGACTGA
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Protein sequence | MLIEHRPDGL LAAISLDFPD GHQLGRHFHP QAQFLYAARG LMRLATHHGA WVIPPTRAVW IPPRVEHEIF MSGEVHMRTL FIEQPETPTP LSDCCVLAVT PLLREMILRA IHLESQPRLD DFRQRLQGLI LSEIANLERM PLYLPMPRDR RLQAICQALL KQPELGLTLD DWGLRVGASS RTLARLFAQE LQMSFHEWRQ QLRLTEALPR LLAGDSVQVV ARDLGYGSTR AFSSMFRRLL GETPRDYLGR LEQLARVRGR ED
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