Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1167 |
Symbol | |
ID | 5357990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 1166382 |
End bp | 1166978 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640810220 |
Product | hypothetical protein |
Protein accession | YP_001346552 |
Protein GI | 152984920 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGCTGG CCGACATCCA TCACTGGGTA TTCGACATGG ACGGCACCCT GACCCGGGCG GTGCACGACT TCCCGGCGAT CCGCCGGGCG CTGGACATTC CCGAGCAGGA CGACATCCTG CTGCACCTCG CCGCCCTGCC CGAAGCCGAG GCCGCGGCCA AGCACGCCTG GCTGCTGGAG CACGAGCGCG AGCTGGCCGA GGCCGCGCGG CCGGCGCCGG GCGCGCCGGA ACTGGTGCGC GAGTTGCAGC GACGCGGCAT GCGCCTGGGC ATCCTGACCC GCAACGACCA CCAGTTGGCG CTGATTACCC TCGAAGCGAT CGGCCTGGGC GGCTGCTTCC CCACCGAGCA CATCCTCGGG CGTGGCGAGG CGCGGCCCAA GCCGGACCCG GACGGCCTGC TGCGCATCGC CAGGCGTTGG AACGTGACGC CGGCGGAGCT GGTGATGGTC GGCGACTACC GTTTCGACCT CGACTGCGGA CGCGCCGCGG GTAGTCGCAC GGTGCTGGTC AACCTGCCGG AAAACCCCTG GCCGGAGCTG GCCGACTGGC ACGCTGCCGA CTGCCATGCG TTGCTCGAGC AACTGCAAGC GCCGTAG
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Protein sequence | MRLADIHHWV FDMDGTLTRA VHDFPAIRRA LDIPEQDDIL LHLAALPEAE AAAKHAWLLE HERELAEAAR PAPGAPELVR ELQRRGMRLG ILTRNDHQLA LITLEAIGLG GCFPTEHILG RGEARPKPDP DGLLRIARRW NVTPAELVMV GDYRFDLDCG RAAGSRTVLV NLPENPWPEL ADWHAADCHA LLEQLQAP
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