| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1130 |
|---|
| Symbol | |
|---|
| ID | 5358630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 1127673 |
|---|
| End bp | 1128221 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640810184 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001346516 |
|---|
| Protein GI | 152983621 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCGTA CCGGCCGCAC CCTCGCCCTG GGTTGCCTGT TGCTCCTCCA GCCGCTGCTC
GCGCAGGCGG GAGGCAACTC GTTGCTGATT CCAGCGACCG GCCGCTGCGC GCTGAACACC
GTTCCCGAAG AATTGCAGCA AGCCCTCGCC ACCTGCCAGA AGGTCGCCAA CGACGGCGAC
GCCGAGGCGC AATACGAACT GGGCGAGTTC TTCTACGACG GCCAGCGCAT CCCGCGCGAC
CTCCAGGCCG CCCTCAACTG GTTCGAGAAA GCTTCGCTGC AGGGCCATGC CCTGGCCCAG
TACCACCTGG GCACCATGTT TTTCCGCGGC GAAGGGGTAC CGGCGAACAA CGTACAGGCC
TACATCGTGC TGAAGATGGC CGCGGTGAAC GGCGCCGAGG ACGCGCTGGA CAGCGCCGAC
CTGGTGGCCG AGCAGATGAA CCGCGACGAG CTGGACATCG CCACCCGGGT TCTCGGCCAG
ATCTTCCGCA ACTATCTGAT CGAGTTGCAG ACCGCCGGCG GCGTCACGCC CTTCGCGCCG
CTGCCCTGA
|
|---|
| Protein sequence | MFRTGRTLAL GCLLLLQPLL AQAGGNSLLI PATGRCALNT VPEELQQALA TCQKVANDGD
AEAQYELGEF FYDGQRIPRD LQAALNWFEK ASLQGHALAQ YHLGTMFFRG EGVPANNVQA
YIVLKMAAVN GAEDALDSAD LVAEQMNRDE LDIATRVLGQ IFRNYLIELQ TAGGVTPFAP
LP
|
|---|
| |