Gene PSPA7_1053 details

Gene Information

• Locus tag: PSPA7_1053
• ID: 5358003
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 1052051
• End bp: 1052695
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 640810107
• Product: hypothetical protein
• Protein accession: YP_001346439
• Protein GI: 152989403
• COG category: [R] General function prediction only
• COG ID: [COG3577] Predicted aspartyl protease
• TIGRFAM ID: [TIGR02281] clan AA aspartic protease, TIGR02281 family

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGCGCC TGTGCGTCGC CCTGTTTTCC AGCATTCTCG CGCTGCCCTC GCTGGCTGCG 
CCCCAGGTGT TCGTGGTCGG CCTGTTTCCT GGCGCTGCGG TGCTCAACGT CGACGGCCAG 
CGCAAGCTGG TCAGGGTCGG CCAGACCGGC CCGCAGGGCG TCCAGGTGGT CAGCGCCGAC 
AGTCGCAAGG CGGTGCTGCG GGTCGATGGC GTCGAACGCA CCTACGAGTT GAGCCGCGAG 
TACAACGAGG CCGGCTACTC GACGCCGCAG CGGCAGGCCT TCAGCATCGC CCGAGGTACC 
GGCGGGCACT ACTGGGTGGC GGGGTCGGTG AACGGGCAGA ACATGCAGTT CCTGGTGGAT 
ACCGGCGCCA CCAGCATTGC CATGAACGAG AACGAGGCGC GCCGCCTGGG CATCGACTAC 
CGGGTGGCCG GCAAGCCGAT GGTCGCCTCC ACCGCCAGTG GCACCTCGCG CGGCTGGCGG 
GTGACCCTGG ACCGGGTGAA GATCGGCGGC ATCGAAGTGC TGGGCGTCGA GGCGGCGGTG 
ATCGAAGGCG ATCATCCGAC CGAAGCCCTG CTCGGCATGA GCTTCCTCAA CCGGGTGCGT 
TGGCGTGAGG AGCAGGGGAT GCTGCTTATC GAGGCCAAGC ATTGA 

 

Protein sequence

MPRLCVALFS SILALPSLAA PQVFVVGLFP GAAVLNVDGQ RKLVRVGQTG PQGVQVVSAD 
SRKAVLRVDG VERTYELSRE YNEAGYSTPQ RQAFSIARGT GGHYWVAGSV NGQNMQFLVD 
TGATSIAMNE NEARRLGIDY RVAGKPMVAS TASGTSRGWR VTLDRVKIGG IEVLGVEAAV 
IEGDHPTEAL LGMSFLNRVR WREEQGMLLI EAKH