Gene PSPA7_1045 details

Gene Information

• Locus tag: PSPA7_1045
• Symbol: ribD
• ID: 5358320
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 1045397
• End bp: 1046518
• Gene Length: 1122 bp
• Protein Length: 373 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 640810099
• Product: riboflavin-specific deaminase/reductase
• Protein accession: YP_001346431
• Protein GI: 152986432
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0117] Pyrimidine deaminase; [COG1985] Pyrimidine reductase, riboflavin biosynthesis
• TIGRFAM ID: [TIGR00227] riboflavin-specific deaminase C-terminal domain; [TIGR00326] riboflavin biosynthesis protein RibD

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGCCG CCGACCCGCT GTACATGGCC CGCGCCCTGG AGCTGGCGCG CCAAGGGCTG 
TACTCCACCC ATCCGAATCC GCGCGTCGGC TGCGTGCTGG TCAGGGACGG CCAGGTGGTC 
GGCGAGGGCT GGCACGTCCG CGCCGGCGAG CCGCACGCCG AGGTCCATGC CCTGCGCCAG 
GCCGGCGAGA AGGCACGCGG CGCCACCGCC TACGTGACCC TCGAGCCCTG CAGCCACTTC 
GGCCGCACCC CGCCGTGCGC CGATGCGCTG GTGGGCGCCG GGGTGGCGCG GGTGGTCGCG 
GCGATGCAGG ATCCAAACCC CGAGGTTGCC GGTCGCGGCC TGCTGCGTCT GATGCAGGCA 
GGCATCGCGG TGCACAGCGG GGTCCTCGAG GCCGAGGCGC GGGAACTCAA CATCGGTTTC 
ATCAAGCGCA TGGAACATGG CCTGCCGTTC GTCCGGGTCA AGCTGGCGAT GAGCCTGGAC 
GGGCGCACCG CCATGGCCAG CGGGGAAAGC CAGTGGATCA CCGGCCCCGC CGCGCGTTCG 
GCGGTGCAGC GCTTGCGCGC TCGCTCAAGC GTGGTGTTGT CCGGCGCCGA TACGCTGCTG 
GCGGACGATG CGCGGCTCAA CGTACGCCCC GACGAACTGG GCCTGGACGC CGAGCTTACC 
GCGCTCGCCG CGGCTCGCCA GCCGTTGCGG GTGCTGGTCG ACGGGCGCCT GCGGGTGCCG 
CTGGAGTCGG CGTTCTACCA GGCCGGCCCG GCGCTGGTGG CGACCTGCGC CGCCGCCTCC 
GCGCGCGAAC GCTTCCAGGA CGCCGGCCAC GAACTGCTGG CGCTGCCCTC CGCCGAGGGC 
CACGTCGATT TGCACAAGCT GCTCCTGGAA CTGGCGGCGC GCGGTGCCAA TGAAGTGCTG 
GTGGAGGCCG GCCCGCGCCT GGCCGGCGCC TTCGCCCGGC TGGGGCTGGT GGATGAGTAC 
CGGCTGTTCG TCGCACCGAA GTTCCTCGGC TCCAGCGCCC GTCCTTTGCT CGACTGGCCG 
CTGGCGCGGA TGGCCGATGC GGCGGAGCTG GAGATCGACG ACATCCGCGC GGTGGGCGAC 
GACTGGCTGG TCACCGCGCG GCCCCGTCCG CAGGACGCCT GA 

 

Protein sequence

MNAADPLYMA RALELARQGL YSTHPNPRVG CVLVRDGQVV GEGWHVRAGE PHAEVHALRQ 
AGEKARGATA YVTLEPCSHF GRTPPCADAL VGAGVARVVA AMQDPNPEVA GRGLLRLMQA 
GIAVHSGVLE AEARELNIGF IKRMEHGLPF VRVKLAMSLD GRTAMASGES QWITGPAARS 
AVQRLRARSS VVLSGADTLL ADDARLNVRP DELGLDAELT ALAAARQPLR VLVDGRLRVP 
LESAFYQAGP ALVATCAAAS ARERFQDAGH ELLALPSAEG HVDLHKLLLE LAARGANEVL 
VEAGPRLAGA FARLGLVDEY RLFVAPKFLG SSARPLLDWP LARMADAAEL EIDDIRAVGD 
DWLVTARPRP QDA