| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1018 |
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| Symbol | |
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| ID | 5353995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 1018039 |
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| End bp | 1021068 |
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| Gene Length | 3030 bp |
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| Protein Length | 1009 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640810072 |
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| Product | adhesive protein CupB5 |
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| Protein accession | YP_001346404 |
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| Protein GI | 152989378 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.284554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAT GCTATGCACT GGTCTGGAAC GCATCCCAGG GCTGCTGGAA CGTCGCCAGC
GAAGGTAGCC GTCGGCGTGG CAAGACCGCT GGCGTACGGG CGGTGGCGGC CTCGCTCCTC
GCCCTGATGG GCGCGGGCGC CCTGGCTCCG GCCTATGCAC TGCCGACCGA CCCCAAGGTG
GTGGCCGGCA GCGGAGACAT CCAGTTGGTC GGCGCCAAGA GCATGTCGAT CAACCAGCAC
ACCGAGAAGC TGATCACCAA CTGGGATTCC TTCAGCGTCG GCGCCGGCGA GCGAGTAACC
TTCAACCAGC CAACCTCGGC TTCGATTGCC CTGAACCGGG TGCTCGGCAC CAGGGCCAGC
GATATCCAGG GCAATATCGA CGCCAACGGC AAGGTATTCC TGGTCAACCC CAACGGCGTG
CTCTTCGGCC GTAATGCCCA GGTCAACGTC GGTGGCCTGG TGGTTTCGAC GCAGGACATC
AAGGACGCCG ATTTCCTGGC CAGCAAGTTC CAGTTCTCCG GCTCGTCGAC CAGCGAAGTG
CTCAACATGG GGCGCCTGAG CGCGGCGGAA GGGGGATCCA TCGCCTTGCT GGGCGCCCGG
GTCGACAACC AGGGGACGAT CCTGGCGCAG ATGGGCACCG CCGCTCTCGG CGCAGGTGGC
GATTTCACCC TGAACTTCGA TGGCAACCGG CTGCTCGATA TCCAGGTCAA CGGCGCCGTC
GTCGGTGCGC TGGCGAAGAA CGGCGGCCTG CTGAAGGCCG ATGGCGGCCA GGTGCTGATG
ACCGCCAGGG CAACCACCAC GGTCCTCGGC TCGGTGGTGA ACAACCAGGG CGCCATCGAG
GCCAGGAGTC TGCGCGGCCA GTCCGGCAAG ATCATCCTCG ATGGCGGTTC GGGCAAGGTG
CTCGTGGCCG GCGCGCTGTC CGCCAACGCG CTGAACGAGC CGGGCCACGG TGGCACGGTG
GAGATGAAAG CGGCCGAGGT CGAGGTCAAC CTGGCGACCC AGGTGAACAC CCTGGCCAGC
AACGGCAACA ATGGCATCTG GAAGATCAGC GCCGACAAGG TCGACGTCCA TCGCACGGCG
CTGGCCAGCG GCGGCACCGT GCATGTCGAT ACCCTGTCGC GCAACCTGGC GACCACCAAT
ATCGAACTGA ACTCGACCAA GGGCGACCTG AACCTGAATG GTCCGGTGGC CTGGGCCTCG
GGCAACCGGC TGGCGCTGAA CTCCGCCGGC GACCTGAACC TGAACGGCAA GCTGACCGCT
ACCGGCGTCA ATGCCAGGCT GGGTCTGCAG GCCAAGGGCG GGATCGAGAT CAACGACAAG
ATCGTGATCA GCGGCGCCTC CAGCGGCATG AGCCTGGAGG CCGGCAACGG ACATCGGGTG
AACGGCAATG CGTCGGTCAC GCTGTCCGGC GCCAATGCGA GCTATGTCTC GGGCGGTTAT
TACTACACGG TGGTCCAGAC CCTGGCGCAA CTGCAGGCGA TCAACACCAA CCTGGACGGC
CTCTACGTCC TCGGCAACAA CATCCTGGGC AGCTACTACT GCACGGCATT GCAGTCCATT
GGCGGTCCCG CCGGCGTCTT CACCGGAACC CTGGATGGTC TGGGCAACAC CATCGGCAAC
CTCTCGATCA CCAACACCGG GGCCAACGTC GGCCTGTTCG CCCGCTCTTC CGGCACCCTG
TCCAACCTGA AGCTGGACAA CCTGCGGGTC TCCGACAGCA ACTACGGCGC CGGGCCGTCC
TCCCTCGGCG CGCTGGTGGG TATCAACAAC GGCCTGGTTT CCAATGTCAC CGCCACCCGG
ATCAGCGTCA ATGGCAGCAG TTCGCGCTCC AACGCCGTGG GCGGCCTGGT CGGCCGCAAC
AACGGCGGGC GGATTCGCGC CGCCAGCGTC AGCGGCACGG TCAGCGGCTA CGCGCCCACC
ACCGCGATCG GCGGTTTGGT CGGCGAGAAC GCTTCCAATG GTCGGCAGGC GCTGATCGAG
GACAGTAATT CCAGCGTGCA GATCGCCGCC AGGTCCACCG AGCGCAACAG CCTGGGCGGC
GTCGGCGGCC TGGTCGGGTT GAATTCGCGC GGCGTGATCA ACAACTCCCA TAGCCAGGGC
CGGGTCGATG CCTCCAGGGC CGGCCTCAAC GTGGGTGGCC TGGTCGGTTT CAACCTGATG
GGCGAGATAT TCCGCAGCAG CGCCAGCGGC CAGGTGGTGG CGGGCAGCGC CGGCTATACT
GGCGGCCTGA TCGGCTTGAA CAGCAACGGT GTGATTTCGC AGTCCCAGGC CAGCGGCATG
GTTTTCAGCA GCAGCGGCCT GGCGACCGGC GGGTTGGTGG GCAGGAACGA GGGCGACAGC
GAGCTGAGGA ACGTCAAGGC CAGCGGCAAT GTCACGGACA GCTACGGTAC GGACATCGGC
GGCCTGATCG GAGTCAATAC CGCCGCGCGG GTGGATACCG CCGAGGCGAC CGGCAAGGTC
ACCGGGGGCG CCAACAGCCG GGTCGGCGGT CTGGTCGGCA GCAACATCAG CGCCTCGCTC
GATCATGTGA TCGCCCGCGG CGCCGTGTTC GGCGGCATCA ACAGCCAGGT CGGCGGAATC
GCCGGCAGCA ACAGCGGCGA GATCTCCAGC GCGGATACCC GCGGCATCGT CTCCGCTGGC
TCGAACAGTT CGCTCGGCGG CCTGGTAGGG ACCAACTTCG GCAGCATCAT GGCATCCAGC
AGCAAGAACG ACGTGCGGGG CGGGAGCCGC AGCCGCATCG GCGGTCTGGT GGGCGAGAAC
CAGATCCAGG GACGAATCAG CTCTTCCAGC TCGGAGAGCA CCGTCAGCGG CGACTACTAC
ACCACCATGG GCGGTATTGC CGGAGTCAAC CTGGGGCGGA TCGAGTACTC CGGCGTCAGC
GGCAGGATCA ACTTCAGGCC GCAATCCAAC TATGGGCAGA TCTACGGCTC CCTGGTGGGC
GAGAACCGTG GCGTCCTCGT CGGCAACTAC GTGACCGGCG AGGCGGCGGT CCTGCCGCCT
GCCGGCGTCG ACTACGGGCA AATCTGGTAA
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| Protein sequence | MNKCYALVWN ASQGCWNVAS EGSRRRGKTA GVRAVAASLL ALMGAGALAP AYALPTDPKV
VAGSGDIQLV GAKSMSINQH TEKLITNWDS FSVGAGERVT FNQPTSASIA LNRVLGTRAS
DIQGNIDANG KVFLVNPNGV LFGRNAQVNV GGLVVSTQDI KDADFLASKF QFSGSSTSEV
LNMGRLSAAE GGSIALLGAR VDNQGTILAQ MGTAALGAGG DFTLNFDGNR LLDIQVNGAV
VGALAKNGGL LKADGGQVLM TARATTTVLG SVVNNQGAIE ARSLRGQSGK IILDGGSGKV
LVAGALSANA LNEPGHGGTV EMKAAEVEVN LATQVNTLAS NGNNGIWKIS ADKVDVHRTA
LASGGTVHVD TLSRNLATTN IELNSTKGDL NLNGPVAWAS GNRLALNSAG DLNLNGKLTA
TGVNARLGLQ AKGGIEINDK IVISGASSGM SLEAGNGHRV NGNASVTLSG ANASYVSGGY
YYTVVQTLAQ LQAINTNLDG LYVLGNNILG SYYCTALQSI GGPAGVFTGT LDGLGNTIGN
LSITNTGANV GLFARSSGTL SNLKLDNLRV SDSNYGAGPS SLGALVGINN GLVSNVTATR
ISVNGSSSRS NAVGGLVGRN NGGRIRAASV SGTVSGYAPT TAIGGLVGEN ASNGRQALIE
DSNSSVQIAA RSTERNSLGG VGGLVGLNSR GVINNSHSQG RVDASRAGLN VGGLVGFNLM
GEIFRSSASG QVVAGSAGYT GGLIGLNSNG VISQSQASGM VFSSSGLATG GLVGRNEGDS
ELRNVKASGN VTDSYGTDIG GLIGVNTAAR VDTAEATGKV TGGANSRVGG LVGSNISASL
DHVIARGAVF GGINSQVGGI AGSNSGEISS ADTRGIVSAG SNSSLGGLVG TNFGSIMASS
SKNDVRGGSR SRIGGLVGEN QIQGRISSSS SESTVSGDYY TTMGGIAGVN LGRIEYSGVS
GRINFRPQSN YGQIYGSLVG ENRGVLVGNY VTGEAAVLPP AGVDYGQIW
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