Gene PSPA7_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_1001 
Symbol 
ID5358260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp1003087 
End bp1004346 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content69% 
IMG OID640810055 
ProductMFS family transporter 
Protein accessionYP_001346387 
Protein GI152985563 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCATA ACAACAATTC CGCCAGTTAC GAAAACGTCC TGCTCTGCGT GCTGTTCCTG 
ACCTTCGGCT TCGTCTTCTT CGACCGCCTG GCGCTGTCCT TCCTGTTTCC CTTCATGGAA
CAGGAGCTGC AACTGAGCAA CAGCCACCTG GGCATGCTTT CCTCGGTGCT GGCCCTGGCC
TGGGCGGTAT CCGGCGCGCT GGTCGGCGCC TGGTCCGACC GCCGCGGCCA GCGCAAGCCG
CTGCTGATCG TCGCGGTGAT CCTGTTCTCG CTGTGCTCGG CGTTGTCCGG GCTGGTCGGC
GGCTTCCTCG GCCTGCTGCT GTTCCGCGGC ATCATGGGGC TGGCCGAGGG GCCGATCCTG
CCGCTCTCGC AATCGCTGAT GGTCGAGGCC TCCTCGGCGC ATCGCCGCGG CCTCAACATG
GGCCTGCTGC AGGGCTCGGC CGCCGGCCTG CTCGGCGCGG TGCTCGGCCC GCCGCTGCTG
GTGGCCCTGG CCGAAGCCTT CGGCTGGCGC CACGCCTTCA TCGTCTCGCT GTTGCCGGGG
CTGCTGATCG CCTGGCTGAT CTGGCGCCAC GTGCGCCCCG ATCCACCCCG CGAACGGGTC
CCGGCAATTC ACGCGCACGC CGCGAAAGGC AGCCGCCTGG CACTGCTGAA GAGCCGCAAC
ATCCTGCTCT GCACCCTGAT CAGCTGCGTA TTCGTCACCT GGTTCATCGT GCTGATTTCC
TTTACCCCGA CCTTTCTGGT CAATGCCCGC GGCTTCAGCC CGGCGACCAT GGGCAGGCTG
ATGAGTTGCC TGGGCGTCGC CTGGGTGATC TGGGGTTTCG CCGTGCCGGC GATCTCCGAC
CGCCTCGGCC GCCGGCCGAC CCTGGTGGCG TTCTCGCTGC TCGCCGCCTG CTGCCCGCTG
GCGCTGCTCT ACGCGCCGAC CGCGACCAGC CTCGGCCTGC TGTTGCTGCT GACCTACACC
GGGCTCGGCT GCTTCACCCT GTTCATGGCC ACCATCCCGG CGGAAACCGT CTCGCGTACC
GCCATCGCCA CCGCCCTCGG CCTGATCATG GGCCTGGGCG AACTGATCGG CGGCTTCGTC
GCGCCCACCG TCGCCGGTTT CGCCGCCGAC CGCTTCGGCC TTTCCGTGGT CATGTGGATG
TCCTGCGGCG GCGCCCTGCT CGCCGCCGTC CTCTCGCTGT TCCTGCGCGA AACCGCGCCG
GCCGCGCTGG CCCGCCGCGG CACGCCGAAC GCTTCCATCC TGCAAGGAAA CCAACCATGA
 
Protein sequence
MAHNNNSASY ENVLLCVLFL TFGFVFFDRL ALSFLFPFME QELQLSNSHL GMLSSVLALA 
WAVSGALVGA WSDRRGQRKP LLIVAVILFS LCSALSGLVG GFLGLLLFRG IMGLAEGPIL
PLSQSLMVEA SSAHRRGLNM GLLQGSAAGL LGAVLGPPLL VALAEAFGWR HAFIVSLLPG
LLIAWLIWRH VRPDPPRERV PAIHAHAAKG SRLALLKSRN ILLCTLISCV FVTWFIVLIS
FTPTFLVNAR GFSPATMGRL MSCLGVAWVI WGFAVPAISD RLGRRPTLVA FSLLAACCPL
ALLYAPTATS LGLLLLLTYT GLGCFTLFMA TIPAETVSRT AIATALGLIM GLGELIGGFV
APTVAGFAAD RFGLSVVMWM SCGGALLAAV LSLFLRETAP AALARRGTPN ASILQGNQP