Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1001 |
Symbol | |
ID | 5358260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 1003087 |
End bp | 1004346 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640810055 |
Product | MFS family transporter |
Protein accession | YP_001346387 |
Protein GI | 152985563 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCATA ACAACAATTC CGCCAGTTAC GAAAACGTCC TGCTCTGCGT GCTGTTCCTG ACCTTCGGCT TCGTCTTCTT CGACCGCCTG GCGCTGTCCT TCCTGTTTCC CTTCATGGAA CAGGAGCTGC AACTGAGCAA CAGCCACCTG GGCATGCTTT CCTCGGTGCT GGCCCTGGCC TGGGCGGTAT CCGGCGCGCT GGTCGGCGCC TGGTCCGACC GCCGCGGCCA GCGCAAGCCG CTGCTGATCG TCGCGGTGAT CCTGTTCTCG CTGTGCTCGG CGTTGTCCGG GCTGGTCGGC GGCTTCCTCG GCCTGCTGCT GTTCCGCGGC ATCATGGGGC TGGCCGAGGG GCCGATCCTG CCGCTCTCGC AATCGCTGAT GGTCGAGGCC TCCTCGGCGC ATCGCCGCGG CCTCAACATG GGCCTGCTGC AGGGCTCGGC CGCCGGCCTG CTCGGCGCGG TGCTCGGCCC GCCGCTGCTG GTGGCCCTGG CCGAAGCCTT CGGCTGGCGC CACGCCTTCA TCGTCTCGCT GTTGCCGGGG CTGCTGATCG CCTGGCTGAT CTGGCGCCAC GTGCGCCCCG ATCCACCCCG CGAACGGGTC CCGGCAATTC ACGCGCACGC CGCGAAAGGC AGCCGCCTGG CACTGCTGAA GAGCCGCAAC ATCCTGCTCT GCACCCTGAT CAGCTGCGTA TTCGTCACCT GGTTCATCGT GCTGATTTCC TTTACCCCGA CCTTTCTGGT CAATGCCCGC GGCTTCAGCC CGGCGACCAT GGGCAGGCTG ATGAGTTGCC TGGGCGTCGC CTGGGTGATC TGGGGTTTCG CCGTGCCGGC GATCTCCGAC CGCCTCGGCC GCCGGCCGAC CCTGGTGGCG TTCTCGCTGC TCGCCGCCTG CTGCCCGCTG GCGCTGCTCT ACGCGCCGAC CGCGACCAGC CTCGGCCTGC TGTTGCTGCT GACCTACACC GGGCTCGGCT GCTTCACCCT GTTCATGGCC ACCATCCCGG CGGAAACCGT CTCGCGTACC GCCATCGCCA CCGCCCTCGG CCTGATCATG GGCCTGGGCG AACTGATCGG CGGCTTCGTC GCGCCCACCG TCGCCGGTTT CGCCGCCGAC CGCTTCGGCC TTTCCGTGGT CATGTGGATG TCCTGCGGCG GCGCCCTGCT CGCCGCCGTC CTCTCGCTGT TCCTGCGCGA AACCGCGCCG GCCGCGCTGG CCCGCCGCGG CACGCCGAAC GCTTCCATCC TGCAAGGAAA CCAACCATGA
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Protein sequence | MAHNNNSASY ENVLLCVLFL TFGFVFFDRL ALSFLFPFME QELQLSNSHL GMLSSVLALA WAVSGALVGA WSDRRGQRKP LLIVAVILFS LCSALSGLVG GFLGLLLFRG IMGLAEGPIL PLSQSLMVEA SSAHRRGLNM GLLQGSAAGL LGAVLGPPLL VALAEAFGWR HAFIVSLLPG LLIAWLIWRH VRPDPPRERV PAIHAHAAKG SRLALLKSRN ILLCTLISCV FVTWFIVLIS FTPTFLVNAR GFSPATMGRL MSCLGVAWVI WGFAVPAISD RLGRRPTLVA FSLLAACCPL ALLYAPTATS LGLLLLLTYT GLGCFTLFMA TIPAETVSRT AIATALGLIM GLGELIGGFV APTVAGFAAD RFGLSVVMWM SCGGALLAAV LSLFLRETAP AALARRGTPN ASILQGNQP
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