Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0996 |
Symbol | |
ID | 5357741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 998071 |
End bp | 999750 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640810050 |
Product | alcohol dehydrogenase |
Protein accession | YP_001346382 |
Protein GI | 152986397 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTTCCA CTGCCCGCCG CGCGTTCGAC TACATCGTGG TCGGCGCCGG TTCCGCCGGC TGCGTCCTGG CCAACCGGCT GTCCGCCGAC CCCGCCGTTT CCGTCTGCCT GGTCGAGGCC GGACCGAGCG ACCGCACGCC GCTGCCCGCC GCCTACATCC GCACGCCGGC CGGGATCATC CGCCTGATCG CCAATCCGAA ATGGAACTGG ATGCACCGTT TCGCCGCCCA GCCCGGCACC GCCGGGCAGC CGATCGCCTG CCCGCGCGGC AAGGTCTGGG GCGGTTCCAG CGCGATCAAC GGAATGATCT ACATCCGCGG CGACCGCCAC GACTACGACC GCTGGGCGGC GTTGGGCAAC CGCGGCTGGA GCTACGACGA ACTGCTGCCC TATTTCCGCC GCTCGGAACA TTTCGAGCCG GGCGAATCCC CCTGGCACGG CCGCGGCGGC GAGCTGAACG TCGCCGAACA GCGTAGCCCG AGCCCGATCA ACCAGGTGTT CTTCCAGGCC GCCGAGGAAA TGGGCTGGCC CTACAACGCC GACTTCAACG GCGAACGACA GGAAGGCGTC GGACCGTTCC ACGTCACCCA GGTCAACGGC GAGCGTTGCA GCGCGGCGCG TGCCTTCCTG CACCCGGCCC TGGCGCGGCC CAACCTCACC GTGCTCAGTC CGGCGCTGAC CCTGCGCGTG CTGCTGGAAG GCACCCGCGC CAGCGGCGTG GAGATCAGCC AGGCTGGCGA AGTCGTGCGA TTGCAGGCGC GCCGCGAGGT GATCCTCAGC GCCGGCTCGA TCAACTCGCC GCAGCTCCTG CTGCTCTCGG GCATCGGCCC GGCGGCGGAA CTGGCGCGCC ACGGCATCGT CCAGCGCCAC GAGCTGCCGG GGGTCGGCGA AAACCTGCAG GACCACCAGG ACATCGTGCT GATGTACCGC ACCGAGGCCG ACCTCGGCTA TGGCCTCGGC CTCTCGCCGA GGGGCTGGCT GCCGCTGCTG CGCTCGCCCT GGCAGTACCT GTTCGGCCGG CGCGGGGCGC TGACCTCGAA TACCGTCGAG TCCGGCGGCT TCCTCCGCCT CGACCCGCAG GCACCGACCC CGGAGCTCGG CCTGATCGTC GCCCCGGCAC TGAAGAACCA GCCGCGGCGG CTGGTCCCCT TCGGCCATGG GGTCAGCCTG CATGTGGCGG TGATGCATCC GCAGAGTCGC GGGAGGATCC GCCTGAACTC GCCGGACCCG CACGACCGGC CGCTGGTCGA GGCCAACTTC CTCAGCCATC CGGCCGACCT CGACACCCTG GTCCAGGGCT TCCAGCTGAT CCGCAGGCTG GCCGCCAGCC GCAGCTTCGC CCGCCACCTC AAGGGCGAAC TGGTGCCGGG CCCGCAGGTC TCCAGCCGCG GCCAGATCGA GGCCTGGATC CGCGCCAGCC TCGGCACCGT GTTCCATCCG GTGGGCACCT GCAAGATGGG CCACGACGAG CTCGCCGTGG TCGACGACCA GTTGCGCGTG CACGGCCTGG AGGGCCTGCG GGTGGCCGAT GCGTCGATCA TGCCGACGCT GATCACCGGC AACACCAACG CCCCGGCGAT CATGATCGGC GAGAAGGCCG CCGACCTGAT CCTCGGCAAG CCGGCGCCGG CGGCGCGCGC CACAGGACAA GCGCTCCGGG AGGCACTCGC CGACGCCTAG
|
Protein sequence | MTSTARRAFD YIVVGAGSAG CVLANRLSAD PAVSVCLVEA GPSDRTPLPA AYIRTPAGII RLIANPKWNW MHRFAAQPGT AGQPIACPRG KVWGGSSAIN GMIYIRGDRH DYDRWAALGN RGWSYDELLP YFRRSEHFEP GESPWHGRGG ELNVAEQRSP SPINQVFFQA AEEMGWPYNA DFNGERQEGV GPFHVTQVNG ERCSAARAFL HPALARPNLT VLSPALTLRV LLEGTRASGV EISQAGEVVR LQARREVILS AGSINSPQLL LLSGIGPAAE LARHGIVQRH ELPGVGENLQ DHQDIVLMYR TEADLGYGLG LSPRGWLPLL RSPWQYLFGR RGALTSNTVE SGGFLRLDPQ APTPELGLIV APALKNQPRR LVPFGHGVSL HVAVMHPQSR GRIRLNSPDP HDRPLVEANF LSHPADLDTL VQGFQLIRRL AASRSFARHL KGELVPGPQV SSRGQIEAWI RASLGTVFHP VGTCKMGHDE LAVVDDQLRV HGLEGLRVAD ASIMPTLITG NTNAPAIMIG EKAADLILGK PAPAARATGQ ALREALADA
|
| |