| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0981 |
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| Symbol | |
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| ID | 5358584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 981467 |
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| End bp | 985723 |
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| Gene Length | 4257 bp |
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| Protein Length | 1418 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640810035 |
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| Product | putative sensor/response regulator hybrid |
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| Protein accession | YP_001346367 |
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| Protein GI | 152987294 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3614] Predicted periplasmic ligand-binding sensor domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.195382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGTAC GACAGAGCAA GTTCAAATTG AGCCGCTGGG CCGGCGCGAC GCTGCTGCTC
GGCCTGCTGC TGTCCGGGCT GGGCGCCTGG GGCCTGGCGC TGGTCAACCA GCAGCAGGCG
CGGGCGGCGC TGGAGCGTGA GGCTGAACTG GTGGCCGAGG CGGTGACGCG GCGCATCGAG
CTTTACCAGT ATGGCCTGCG TGGCGTGCGC GGGGCATTGC TGACCGCCGG CGAGGCGCAC
ATCGACCGCG AGCTGTTCCG TCGCTACAGC CTGACCCGCG ACATCGACCG CGAGTTTCCC
GGCGCCCGCG GCTTCGGTTT CATCCGCCGG GTGGCGGCCG CCGACGAGGC CGGGTTCCTG
GGCCAGGCGC GGGCCGATGG CCAGCCGGAG TTTCGTATCC AGCAACTGAC TCCGCACGAT
GGCGAGCGCT ACGTCATCCA GTACATCGAG CCGCTGGCGC GCAACGACCA GGCTCTGGGC
CTGGACATCG CCTCGGAAAC CAATCGTCGC GAGGCCGCCC GCGCCGCCCT GGAAAGCGGG
CAGGTGCGCC TGACCGGGCC GATCACCCTG GTCCAGGCCA GCGGCCTGCG CCAGCAGTCG
TTCCTCATCC TGATGCCGAT CTACCGTAGC GGCACCACCC CGCCCGCCGG CGCCCAGCGC
GAACTCGAAG GCTTCGGCTG GAGCTACGCG CCGCTGCTGA CCAGCGAGGT GCTGGCCGGG
CTGCCCATCG ACAACGCCGC GATCCACCTG GAGCTCAGCG ACGTCACCGG CGATGGCGCC
GCCGTGCCGT TCTTCGTCAA CGGCGCCGCG GCCCCGGGCC AGCGCCTGTT CGGCCAGGAG
TTGCAGCGGG AGATATACGG CCGCCACTGG CAGATGCAGT TCAGCGCCCT GCCGTTGTTC
GTCCAGCGCC TGCACCAGCC GTCCCCGCGT ATCCTGTTCC TGGCCGGCGG CCTGGTCAGC
CTGCTGCTGG CGGCGCTGGT CAACGCCGGA GCCCTCGGCC GCCAGCGCCG GCGGCGCGAG
GCGGCGACCC AGGCGCGGCT GGCGGCGATC GTCGGCAATT CGGCGGACGG CATCATCGGC
GCCGCGCTCG ACGGCACCAT CACCGACTGG AATCGCGGCG CCGAGGCATT GTTCGGCTAC
CGCGAGGAGG AGGCGGTCGG GCGGCGGGTG GTGGACCTGC TGGTGCCGCC ATCGAAGGAG
AGCGAGGAAC TCGACATCCT CGCCCGCATC GCCCGCAACG AACAGGTGGT CAGCTTCGAC
ACCGTGCGCC GGCACCAGGA CGGCCACCTG CTCGACGTGG CGGTGACCGT CTCGCCGATC
CTCGATGGGG AAGGCAGGGT GGTCGGCGCG TCGAAGACGG TGCGCGACAT TTCCGCGAAG
AAGGCCGCCG AGGCGCGCAT CCGCGAACTC AACGCCGGTC TGGAACACCA GGTCGCCGAG
CGTACCGCCG AACTGCGCCG GCTCAACGTG CTGCTCGGCA GCGTGCTGCA GGCGGCCTCC
GAGGTTTCGA TCATCACCCT CGACCGCGAC GGCATCATCA GCGGTTTCAA CCTCGGTGCC
GAGCGGATGC TCGGCTACCG CGCCGAGGAA GTGGTCGGCA AGGTCTCGCC GACTCTCCTG
CACAGCGAGC GGGAACTGCT CGCCCGTGGC CGCGAACTGG GCGAGCAGGG TTTCCGCGTG
CTGGTGGCGC GCGCGGAGCG GGAAGGCGCC GAGACCCGCG AATGGACGTA CCTGCGCAAG
GACGGTTCGC CACTGAGCGT GACCCTCTCG GTCACCGTCC TGCGCGACGA GGCCGGGGCG
ATCAACGGCT ACCTGGGTAT CGCCGTCGAC GTCACCGAGT GGCGCAACGC CGAGCGCGAG
ATGGCCGCGG CGCGCGACCA GCTGCAGATG GCCGCCGACG TGGCGCGCCT GGGCATCTGG
CGCTGGACCC TGGCCGACGA CAGCCTGCAG TGGAACGAGC GCATGTGCGA ACTGTATGGC
CAGCCGCTGG CGCTGCGCGA AGGCGGGCTG GTCTACGAGC ACTGGCGCAG CCGCCTGCAT
CCGGAAGACC TCGAGCGCAC CGAGGCCAGC CTGCGCGCGG CGGTGGAAGG GCGCGGCAAC
TACGACGTGA TCTTCCGCGT GCTGCTGCCC GACGGCGGCA TCCGCTTCAT CCAGGCCGGC
GCCCAGGTCG AGCGCGACGC CGACGGCACG CCGCTGCAGG TCACCGGGAT CAACATCGAT
ATCACCAGCG ACCAGCAGTT GCAGGCGCGC CTGCGCGAGG CCAAGGAGCA GGCGGACGCC
GCCAGCGCGG CGAAGTCTTC GTTCCTGGCC AACATGAGCC ACGAGATCCG CACGCCGATG
AACGCCGTGC TGGGCATGTT GCAGCTGGCC CGGCAGACCG ACCTCAACGA ACGCCAGCGC
GATTACCTGG ACAAGGCCAG CTCGGCGGCG ACCTCATTGC TCGGCCTGCT CAACGACATC
CTCGACTACT CGAAGATCGA GGCCGGCAAG CTGCTCCTGG AAATGCACCC GTTCGAGCTG
GAGCCGCTGA TGCAGGACCT CGCCGTGGTG CTCTCCGGCA ACCAGGGCGA CAAGGACGTG
GAGGTGATCT TCGACATCGA TCCCGAACTC CCCAGCGCGG TGGTCGGCGA CCGCCTGCGG
CTGCAGCAGA TCCTCATCAA CCTGGCCGGC AACGCGCTGA AGTTCACCGC CCACGGTCAT
GTGCTGGTCA GCCTGCGGCG GCTGGCGCAC GACGCGCATC GGGTAGGCCT GCGCGTCCTG
GTGGCGGATA CCGGCATCGG CATCAGTGCC GAGCAGCAGC AGCGTATCTT CGAAGGGTTC
ACCCAGGCCG AGGCGTCCAC CTCGCGGCGT TTCGGCGGCA CCGGCCTCGG CCTGTTCATC
TGCAAGCGCC TGGTCGACCT GATGGGCGGC CGGTTGCAGG TGGAAAGCTC GCCGGGAAGC
GGCAGCCGGT TCTGGTTCGA CCTGGACCTC GACGTGGCTC GCGGCGAACC GCTGCGCGCG
GCCTGCCCTG GAGTCGGCGA ACCTCTGCGG CTGCTGGTGG CCGACGATAA CCTGATCGCC
GGCGAGCTGC TCGAGCGCAC GGTGGGAGCC CTCGGCTGGC GCGCCGACTG TGTCGGCAGC
GGCAGCGAGG CGGTGGCGCG GGTACAGGCG GCGATGGCCG AGGGTCGTCG TTACGACGTG
GTACTGATGG ACTGGCGCAT GCCCGACCTC GACGGCCTGA GCGCGGCGCA ACTGATCCGC
CAGTTGCAGG GCGACCTGCC GCCCCCGATG GTGATCATGA TCACCGCCTA TGGCCGCGAG
GTGCTCGCCG ACGCCCGCGA CCACAGCGCG CCGCCCTTCG TCGACTTCCT GACCAAGCCG
GTCACCCCCA AGCAACTGGC CGACTCGGTG CTGCACGCGC TGCACGGCGA ACAGGGCGCC
CCGGCCAATC CGCCGCCGCG CCCGCAGGAG CGCCCGCAAC GCCTGCGGGG CGTACGCCTG
CTGGTGGTGG AGGACAACGC GCTGAACCGT CAGGTCGCCG CCGAGCTGTT GAGCAGCGAG
GGCGCCCGGG TATCCCTCGC CGATGGCGGG CTGGCGGGCG TGCAGCAGGT GCTGGAGGCC
GGCGTGCCGT TCGACGCGGT GCTGATGGAC ATGCAGATGC CGGATATCGA CGGCCTCGAG
GCGACCCGGC GGATCCGCGC CGACGGCCGC TTCGCCGGGC TGCCGATCCT GGCCATGACC
GCCAACGCCT CGCTGTCCGA CCGCGAGGCC TGCCTGGCGG CGGGGATGGA CGATCATGTG
GCCAAGCCCA TCGACAAGGA GCGTCTGGTG CTCTGCCTGC TCGGTCATCT CGGCCGGTCC
GTCGACACGG CTGCGGTGCC GGCGCCGGCG GCGGAGACGA CCGAACTGGT CGAGGCGCGT
GGCGACATCG TCGGCCGCTT CGGCGGCAGC CTCGAGCTGA TCGTCCAGGT GCTGCGACGC
TTCGTGCCGG ACATGCAGGA ACTCCTCGGC CAGCTCGAAC GCCAGTTGGG CGAGGGAGAT
ATCCAGGGCT GCGCGGCGAC CCTGCACACC ATCAAGGGCA GTGCCGCCAC CGTCGGCGCC
AGCGCCCTGG CCGGTCGCGC CGGCGAGCTG GAACTGGCGC TGCGTCGCGT CGATCCGCTG
GACGGCGCGG AGTGCCTGGC CGGCATCCGC CTCGACGAGC TGCGCGCCCT GCGCGATACC
TGCCTGCAGC GCCTGCAGGG AATGTTCGGC GACGTGCAGG CGGAATCGGC GAGCTGA
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| Protein sequence | MNVRQSKFKL SRWAGATLLL GLLLSGLGAW GLALVNQQQA RAALEREAEL VAEAVTRRIE
LYQYGLRGVR GALLTAGEAH IDRELFRRYS LTRDIDREFP GARGFGFIRR VAAADEAGFL
GQARADGQPE FRIQQLTPHD GERYVIQYIE PLARNDQALG LDIASETNRR EAARAALESG
QVRLTGPITL VQASGLRQQS FLILMPIYRS GTTPPAGAQR ELEGFGWSYA PLLTSEVLAG
LPIDNAAIHL ELSDVTGDGA AVPFFVNGAA APGQRLFGQE LQREIYGRHW QMQFSALPLF
VQRLHQPSPR ILFLAGGLVS LLLAALVNAG ALGRQRRRRE AATQARLAAI VGNSADGIIG
AALDGTITDW NRGAEALFGY REEEAVGRRV VDLLVPPSKE SEELDILARI ARNEQVVSFD
TVRRHQDGHL LDVAVTVSPI LDGEGRVVGA SKTVRDISAK KAAEARIREL NAGLEHQVAE
RTAELRRLNV LLGSVLQAAS EVSIITLDRD GIISGFNLGA ERMLGYRAEE VVGKVSPTLL
HSERELLARG RELGEQGFRV LVARAEREGA ETREWTYLRK DGSPLSVTLS VTVLRDEAGA
INGYLGIAVD VTEWRNAERE MAAARDQLQM AADVARLGIW RWTLADDSLQ WNERMCELYG
QPLALREGGL VYEHWRSRLH PEDLERTEAS LRAAVEGRGN YDVIFRVLLP DGGIRFIQAG
AQVERDADGT PLQVTGINID ITSDQQLQAR LREAKEQADA ASAAKSSFLA NMSHEIRTPM
NAVLGMLQLA RQTDLNERQR DYLDKASSAA TSLLGLLNDI LDYSKIEAGK LLLEMHPFEL
EPLMQDLAVV LSGNQGDKDV EVIFDIDPEL PSAVVGDRLR LQQILINLAG NALKFTAHGH
VLVSLRRLAH DAHRVGLRVL VADTGIGISA EQQQRIFEGF TQAEASTSRR FGGTGLGLFI
CKRLVDLMGG RLQVESSPGS GSRFWFDLDL DVARGEPLRA ACPGVGEPLR LLVADDNLIA
GELLERTVGA LGWRADCVGS GSEAVARVQA AMAEGRRYDV VLMDWRMPDL DGLSAAQLIR
QLQGDLPPPM VIMITAYGRE VLADARDHSA PPFVDFLTKP VTPKQLADSV LHALHGEQGA
PANPPPRPQE RPQRLRGVRL LVVEDNALNR QVAAELLSSE GARVSLADGG LAGVQQVLEA
GVPFDAVLMD MQMPDIDGLE ATRRIRADGR FAGLPILAMT ANASLSDREA CLAAGMDDHV
AKPIDKERLV LCLLGHLGRS VDTAAVPAPA AETTELVEAR GDIVGRFGGS LELIVQVLRR
FVPDMQELLG QLERQLGEGD IQGCAATLHT IKGSAATVGA SALAGRAGEL ELALRRVDPL
DGAECLAGIR LDELRALRDT CLQRLQGMFG DVQAESAS
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