Gene PSPA7_0956 details

Gene Information

• Locus tag: PSPA7_0956
• Symbol: hpaR
• ID: 5359078
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 956595
• End bp: 957017
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640810010
• Product: homoprotocatechuate degradation operon regulator HpaR
• Protein accession: YP_001346342
• Protein GI: 152984643
• COG category: [K] Transcription
• COG ID: [COG1846] Transcriptional regulators
• TIGRFAM ID: [TIGR02337] homoprotocatechuate degradation operon regulator, HpaR

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.199121
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGACGC CAAGACCCTC CCTGACCCTG ACCCTGTTGC AGGCTCGCGA AGCCGCGATG 
AGTTTCTTCC GCCCCTCCCT CAACCAGCAT GGCCTTACCG AGCAGCAGTG GCGGGTGATC 
CGCATCCTGC GCCAGCAAGG CGAGATGGAG AGCTACCAGC TGGCCAACCA GGCCTGCATC 
CTGCGCCCGA GCATGACCGG CGTGCTGGCG CGCCTGGAGC GCGACGGCAT CGTGCGGCGC 
TGGAAGGCGC CCAAGGACCA GCGGCGGGTC TACGTGAACC TGACCGAGAA GGGCCAGCAG 
TGCTTCGTCT CGATGAGCGG TGACATGGAG AAGAACTACC AGCGCATCCA GGAGCGCTTC 
GGCGAGGACA AGCTCGCGCA GCTACTCGAT CTGCTCAACG AGCTGAAGAA GATCAAGCCC 
TGA 

 

Protein sequence

MSTPRPSLTL TLLQAREAAM SFFRPSLNQH GLTEQQWRVI RILRQQGEME SYQLANQACI 
LRPSMTGVLA RLERDGIVRR WKAPKDQRRV YVNLTEKGQQ CFVSMSGDME KNYQRIQERF 
GEDKLAQLLD LLNELKKIKP