| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0936 |
|---|
| Symbol | acoB |
|---|
| ID | 5353669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 936596 |
|---|
| End bp | 937615 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640809990 |
|---|
| Product | acetoin catabolism protein AcoB |
|---|
| Protein accession | YP_001346322 |
|---|
| Protein GI | 152988379 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGAA AGATCAGCTA CCAGCAGGCC ATCAACGAGG CGCTGGCCCA GGAAATGCGC
CGCGACCCGA GCGTCTTCAT CATGGGCGAG GACAATGCCG GCGGCGCCGG CGCGCCCGGC
GAGGACGACG CCTGGGGCGG CGTGCTGGGG GTCACCAAGG GCCTCTACCA CCAGTTCCCC
GGCCGCGTGC TGGACACCCC GCTGTCGGAG ATCGGCTACG TCGGCGCCGC GGTCGGCGCC
GCCACCCGCG GCATGCGCCC GGTGTGCGAA CTGATGTTCG TCGACTTCGC CGGCTGCTGC
CTGGACCAGA TCCTCAACCA GGCCGCCAAG TTCCGCTACA TGTTCGGCGG CAAGGCGGTC
ACCCCGCTGG TGATCCGCAC CATGGTCGGC GCCGGCCTGC GCGCCGCCGC CCAGCATTCG
CAGATGCTCA CCTCGCTATG GACCCACATC CCCGGCCTCA AGGTGGTCTG CCCGTCGTCG
CCCTACGATG CCAAGGGCCT GCTGATCCAG GCGATCCGCG ACAACGACCC GGTGATCTTC
TGCGAACACA AGCTGCTCTA CTCGATGCAG GGGGAGGTAC CCGAGGAGCT GTACACGGTG
CCCTTCGGCG AGGCCAATTT CCTCCGCGAC GGCGACGACG TCACCCTGGT GACCTACGGC
CGCATGGTCC ACCTGGCCAT GGACGCCGCC GCCAGCCTGG CACGCCAGGG CATTTCCTGC
GAGGTACTGG ACCTGCGCAG CACCAGCCCG CTGGACGAGG ACAGCATTCT CGAAAGCGTG
GAAAAGACCG GCCGCCTGGT GGTGATCGAC GAAGCCAACC CACGCTGCTC GATGGCCACC
GACATCGCCG CGCTGGTCGC CGAACGGGCC TTCTCCGCGC TGCGCGCGCC GATCCGCCGG
GTCACCGCGC CGCACACGCC GGTGCCTTTC TCCGACGCCC TGGAAGACCT CTACATCCCC
GACGCGGCGA AGATCGAGGC GGCCGTGCGC CAGGCCCTGG AAGGGAGGGA CGCGGCATGA
|
|---|
| Protein sequence | MARKISYQQA INEALAQEMR RDPSVFIMGE DNAGGAGAPG EDDAWGGVLG VTKGLYHQFP
GRVLDTPLSE IGYVGAAVGA ATRGMRPVCE LMFVDFAGCC LDQILNQAAK FRYMFGGKAV
TPLVIRTMVG AGLRAAAQHS QMLTSLWTHI PGLKVVCPSS PYDAKGLLIQ AIRDNDPVIF
CEHKLLYSMQ GEVPEELYTV PFGEANFLRD GDDVTLVTYG RMVHLAMDAA ASLARQGISC
EVLDLRSTSP LDEDSILESV EKTGRLVVID EANPRCSMAT DIAALVAERA FSALRAPIRR
VTAPHTPVPF SDALEDLYIP DAAKIEAAVR QALEGRDAA
|
|---|
| |