Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0890 |
Symbol | |
ID | 5356648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 887152 |
End bp | 888594 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640809944 |
Product | outer membrane protein |
Protein accession | YP_001346276 |
Protein GI | 152989092 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.189882 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCATC CGCACTTCCC GCGCCTGGCG CTGGCCCTGG GCATCGCCGC GAGCCTGGCG GCCTGCAGCG TCGGCCCCGA CTACCAGCGC CCGCAGACAC CGGCGACACG CATCGCCAGC CAGCACGCCG GCGAGTTCTC CGCCGAGCGG CGGCAGGCGC CCTGGTGGAG CTTCTTCGAC GACCCGCAAC TGGTGCGCCT CGTCGACCAG GCGCTGGCGC GCAACCACGA TATCCGCGAG GCCCGCGCCA ACCTGCGCAG CGCCCGCGCG CTGTACGACG AGCGCTGGCT CGACCAGTTG CCCCAGGTGA CCAGCCAGGC CGGCTACAAC CGCAGCCTCG CGCAGCAGGC GGACTACGAC GGCGAGCCGC GCCGGAGACT TTCGGAGAGC TACCGCGCCG GCTTCGACGC GCAATGGGAA ATCGATCTGT TCGGCCGCCT CGGGCATCTT TCCGATGCCG CCCTGGCGCG TGCCGAAGCG GCCAGTGCCG ACCTCGAGCT GGCGCGCCTG AGCATCGCCG CCGACACCGC CCGCGCCTAC TTCGAGGTCC AGGGCTACCA GCGCCGCCTG GACGTGGCCC GCGCCCAGGT GCGCAGCTGG CGCGACACCC TGGAACTGAC CCGCAGCAGC CTGCAGTTGG GCAGCGGCCT GCCGGAAGAG GTGGAGAACG CCCAGGCCAA CCTGTCGCGC AGCGAAGCGG CGGTTCCGCC GCTGACCAGC GCGCTGGAGG CCGCTCGCTA CCGCCTCGAC GTGCTGCGCG GCGAGGCGCC GGGCAGCGGC GCCCCGGTAC TCGACGGCGG CGCCGCGCCA TTGGCGAAGA ACCTGCCGCT GGGCGACGTC GACTACCTGA TCCTCCAGCG CCCCGACGTC ATCAGCGCCG AACGGCAACT GGCGGCGAGC AGCGAGGATG TCGGCGCGGC CACCGCCGAG CTGTATCCGC GCCTCGACCT GGGCGGCTTC ATCGGCTTCT TCGCCTTGCG CAGCGGCGAC CTCGGCAGCG CTTCGCGTGC CTTCGAACTG GCGCCCGCGG TCAGCTGGCC GGCGTTCCGC CTGGGCAACG TGCGGGCGCG CCTGCGCGCC GCCGAGGCGC AGTCCGACGC CGCCCTGGCG CGCTACCAGC GCACCCTGCT GCTGGCCCAG GAGGATGTCG GCAACGCTCT CAACCAGTTG GCCGAGCACC AGCGCCGGCT GGTCGCCCTG GTGCGCTCCG CGAGCCACGC CGGCAACGCC CTGGAGATCG CCAACGAGCG CTACCGCGCC GGCGCCGGCA GCTACCTGGC GGTGCTGGAG AACCAGCGCG CGCTGTATCA GATCCGCGAG GAGCTGGCAC AGGCGGAGAC CGCCTCGTTC GTCAACGTCA TCGCCCTCTA CAAGGCACTC GGCTGGGGCA CCGACAGTCG TTTGCCGGAG GTCCGCCAAC TGGCCGCCGG CGAAGGCCGC TGA
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Protein sequence | MKHPHFPRLA LALGIAASLA ACSVGPDYQR PQTPATRIAS QHAGEFSAER RQAPWWSFFD DPQLVRLVDQ ALARNHDIRE ARANLRSARA LYDERWLDQL PQVTSQAGYN RSLAQQADYD GEPRRRLSES YRAGFDAQWE IDLFGRLGHL SDAALARAEA ASADLELARL SIAADTARAY FEVQGYQRRL DVARAQVRSW RDTLELTRSS LQLGSGLPEE VENAQANLSR SEAAVPPLTS ALEAARYRLD VLRGEAPGSG APVLDGGAAP LAKNLPLGDV DYLILQRPDV ISAERQLAAS SEDVGAATAE LYPRLDLGGF IGFFALRSGD LGSASRAFEL APAVSWPAFR LGNVRARLRA AEAQSDAALA RYQRTLLLAQ EDVGNALNQL AEHQRRLVAL VRSASHAGNA LEIANERYRA GAGSYLAVLE NQRALYQIRE ELAQAETASF VNVIALYKAL GWGTDSRLPE VRQLAAGEGR
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