| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0874 |
|---|
| Symbol | pchE |
|---|
| ID | 5354001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 859703 |
|---|
| End bp | 864013 |
|---|
| Gene Length | 4311 bp |
|---|
| Protein Length | 1436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640809928 |
|---|
| Product | dihydroaeruginoic acid synthetase |
|---|
| Protein accession | YP_001346260 |
|---|
| Protein GI | 152983977 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
|---|
| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTGC CCCCCGATTC CCGTACCGCC CTGCGCGACT GGCTGGCCGA GCAGCTCGCC
GAATTGCTTG GCGAACCGCT CGACGACGTG CGCGCCCTGG CCGACGACGA CGATCTGCTG
GGTTGCGGCC TCGATTCGAT TCGCCTGATG TACCTGCAGG AGCGCGTGCG GGCACGCGGC
TTGGCGGTGG ATTTCGCCCA GTTGGCGCAG CGACCGAGCC TGGGCGCCTG GCTCGAGCTG
CTGGCCGGCG CGGCGCCGCT CGGGGTTCCG CCCGCGGTGG CCGCGCCGCT GGCGCATGAC
CGGCCATTCG AATTGTCGTC CGTGCAGCAG GCCTACTGGC TGGGGCGCGG CGCCGACGAG
GTGCTGGGCA ACATCAGTTG CCACGCGTTC CTCGAATTCC GCGCTCGCGA CCTCGACCCG
CAGCGCCTGG CCGCGGCGGC GGAGTGCGTG CGCCAGCGAC ATCCGATGCT GCGCGCGCGC
TTTTTCGACG GCCTGCAGCA GGTCCTCGCT GCGCCGCCGC TGCCGTGCTT CGACCTGCAG
GACTGGCGCG CGCGGCAAAC CGACGAAGCC GAGCACGACT GGCGGGCGCT GCGCGAGTGG
CGCGCCCATG AATGCCTGGC GGTGGAGCGC GGCCAGGTGT TCCTGCTCGG GCTGGTGCGC
ATGCCGGGCG GCGAGGACCG CCTCTGGCTG AGCCTCGACC TGCTTGCCGC CGATGTCGAA
AGCCTGCGCC TGCTGCTCGC CGAGCTGGGC GCCGCCTATG TCGCGCCGGA ACGCCTGGCG
GAACCGCCGG CGCTGCATTT CGCCGACTAC CTGGCGTGCC GTGCGGCGCA ACGCGCCGAG
GCCTCGGCGC GGGCCCGCGA TTACTGGCTG GAACGCCTGC CGCACCTGCC GGACGCGCCG
GCCCTGCCGC TGGCCTGCGC GCCGCAAAGC ATCCGCCAGC CGCGCACCCG GCGCCTCGCC
TTCCAGCTTT CCGCCGGCGA GAGCCGGCGC CTGGAGCGTC TCGCGGCGCA GCATGGCGTG
ACCTTGTCCT GCGTGTTCGG CTGCGCCTTC GCGCTGGTCC TGGCGCGCTG GAGCGAAACC
CCGGAGTTTC TCCTCAACGT ACCGCTGTTC GATCGGCATG CCGACGACCC GCGTATCGGC
GAAGTGATCG CCGACTTCAC CACCCTGTTG CTGCTGGAGT GCCGGATGCA GGCCGGGGTG
TCCTTCGCCG AGGCGGTGAA GGGCTTCCAG CGCACCCTCC ACGGCGCCAT CGACCATGCC
GCCTTCCCCG CCCTCGAAGT GCTGCGCGAG GCACGCCGGC AGGGCCAGCC GCGTTCGGCG
CCGGTGGTGT TCGCCAGCAA CCTGGGCGAG GAAGGCTTCG TCCCGGCGGC GTTCCGCGAA
GTCTTCGGCG ATCTCCACGA CATGCTCTCG CAGACCCCGC AGGTCTGGCT CGACCACCAG
CTCTACCGGG TGGGCGACGG TATCCTGCTG GCCTGGGACA GCGTCGTCGG CGTGTTCCCC
GAAGGCCTGC CGGAAACCAT GTTCGAAGCC TACGTGGGAT TGCTCCAGCG TCTCTGCGAC
AGCGCCTGGG AGCAGCCCGC CGAGCTGCCG CTGCCCTGGG CGCAGCAGGC GCGCCGGGCC
GCGCTCAACG GCCAGCCGGC ATGCGCCACG GCGCGCACCC TGCATCGAGA CTTCTTCCTT
CGTGCCGCCG AGGCGCCGGA TGCCGACGCG CTGCTCTATC GCGACCGACG TGTCACTCGC
GGCGAACTGG CCGAGCATGC GCTGCGCATC GCCGGCGGCC TGCGCGAGGC CGGGGTACGC
CCTGGCGACG CGGTCGAGGT CAGCCTGCCG CGCGGGCCGC AGCAGGTCGC GGCGGTATTC
GGCGTGCTCG CCGCCGGCGC CTGCTACGTG CCGCTGGACA TCGACCAGCC GCCCGCACGG
CGGCGCCTGA TCGAAGAGGC CGCCGGGGTA TGCCTGGCGA TCACCGAGGA GGACGATCCG
CAAGCCTTGC CGCCGCGCCT GGACCTCCAG CGCCTGCTGC GCGGCCCGGC GCTGGCCGCC
CCCGTGCCGC TGGCGCCGCA GGCGAGCGCC TATGTGATCT ACACCTCGGG TTCCACCGGG
GTGCCGAAGG GCGTCGAGGT CAGCCACGCG GCGGCGATCA ATACCATCGA CGCGCTGCTC
GACCTGCTGC GGGTGGACGC ATCGGATCGC TTGCTGGCGG TCTCCGCGCT GGACTTCGAT
CTGTCGGTCT TCGACCTGTT CGGCGGCCTC GGCGCCGGTG CCAGCCTGGT CCTGCCGACC
CAGGAACAGG CGCGCGACGC CGCCGCCTGG GCGGAGGCCA TCCAGCGGCA CGCGGTGAGC
CTGTGGAACT CGGCGCCGGC CCTGCTGGAG ATGGCCCTCA GCCTGCCGGC GAGCCAGGCC
GACTACCGCA GTCTGCGGGC GGTGCTGCTG TCCGGCGACT GGGTGGCCCT GGACCTGCCC
GCCCGGCTGC GCCCGCGCGG CTCCAGCGAG TGCCGCCTGC ATGTGCTCGG CGGCGCCACC
GAAGCGGGTA TCTGGTCGAA TCTGCAGAGC GTCGATACGG TGCCGCCGCA CTGGCGTTCG
ATTCCCTACG GCCGGCCGTT GCCGGGACAG GCCTACCGGG TGGTCGACGC GCACGGGCGC
GACGTGCCGG ACCTGGTGGT CGGCGAACTG TGGATCGGCG GCGCCAGCCT GGCCCGTGGC
TATCGCAACG ACCCCGAGCT CAGCGCCCGG CGTTTCGTCC ACGATGCCCA GGGCCGCTGG
TATCGCACCG GCGATCGCGG GCGCTACTGG GGGGACGGCA CCCTGGAATT CCTCGGCCGG
GTCGACCAGC AGGTGAAAGT GCGCGGCCAG CGCATCGAGT TGGGCGAGGT GGAGGCCGCG
CTGTGCGCCC AGGCCGGCGT GGAAAGCGCC TGCGCGGCGG TGCTCGGCGG TGGCGTGGCG
AGCCTCGGCG CGGTGCTGGT AGCGCGCCTG GCGCCACGGG CCGAAGGCTC CATGGAGCTG
CCGGCCGCAC AGCCTTTCGC CGGCCTGGCA GAGGCCGAGG CGGTACTCAC CCGGGAGATC
CTCGGCGCGC TGCTGGAGGC GCCGCTGGAG CTCGACGACG GTTTGCGCCG GCGCTGGCTG
GACTGGCTGG CGGACTCCGC CGCCAGCGCG CTGCCGCCGC TCGACGAGGC GTTGCGCCGG
CTCGGCTGGC AGGCCGCGGG GCTGACCGCG ATGGGCAACG CCTTGCGCGG CCTGCTCGCC
GGCGAACAGG CGCCGGCCGC GCTGCTCCTC GATCCCTGGC TGGCGCCGCA GGCGGTGGCC
GCGCGCTTGC CGGACGGCCG CGAGGCCCTG GCGCGCCTGC TCGAGGCGTT ACCGACGCCG
GCTGCCGGCG AACGCCTGCG GGTGGCGGTG CTGGACACCC GCGCCGGGCT CTGGCTCGAC
CAGGGCATGG CCTCGCTGCT TCGTCCGGGG CTGGAACTGA CCCTCTTCGA ACGCAGCCGC
GTCCTCCTCG ACGCCGCCGC CACCCGCCTG CCGGAGCGGA TCGCGGTGCA GGCGCTGGAC
GACGGCCTGC TACCTGCCGA GCACCTCGGT CGCTACGACC GGGTGATCAG CTTCGCCGCG
TTGCACGCCT ACGACGCCAG CCGCGATGGC CTGGCGCTGG CCGCGGCGTT GCTGCGCCCG
CAGGGCCGCC TGCTGCTGGT CGACCTGCTG CGCGAGTCGC CGCTGGCGTT GCTCGGTGCG
GCCCTGCTCG ACGACCGGCC GCTGCGCCTG GCGGAACTGC CGAGCCTGTT GGCCGATCTC
GCCGCTGCGG GACTGGCGCC GCGTTGCCTG TGGCGCAGCG AACGGATCGC CCTGGTCGAG
GCGCTGGCGC CGGGGCTCGG GCTCGACGCC GCCGCGCTCC AGGCCGGACT GGAGCAACGC
CTGCCCCAGG CGATGCGGCC CGAACGCCTG TGGTGCCTGC CAAGCCTGCC GTTGAACGGC
AATGGCAAGG TCGACCGTCG CCGCCTGGCC GGGAGCATGA CCCGCGCGCT CGGCGAGTGT
CGCGACGAGC CCTCGGCGGA GGAGCCGCTG GAAGCCCATG AGCAGGCGCT GGCCGACTGC
TGGGAAGCGG TTCTCAAACG CCCGGTGCGT CGTCGCGAGG CGAGCTTCTT CAGCCTCGGC
GGCGACAGCC TGCTGGCGAC CCGCCTGCTG GCCGGCATAC GCGAGCGTTT CGGCGTACGC
CTGGGCATGG CCGATTTCTA TCGCCAGCCG ACCCTGGCCG GGCTCGCCCG CCACTTGCAG
GCGCAGACCG ACGAAATCGA GGAAACCCAA CTGGAAGAGG GCGTGCTATG A
|
|---|
| Protein sequence | MDLPPDSRTA LRDWLAEQLA ELLGEPLDDV RALADDDDLL GCGLDSIRLM YLQERVRARG
LAVDFAQLAQ RPSLGAWLEL LAGAAPLGVP PAVAAPLAHD RPFELSSVQQ AYWLGRGADE
VLGNISCHAF LEFRARDLDP QRLAAAAECV RQRHPMLRAR FFDGLQQVLA APPLPCFDLQ
DWRARQTDEA EHDWRALREW RAHECLAVER GQVFLLGLVR MPGGEDRLWL SLDLLAADVE
SLRLLLAELG AAYVAPERLA EPPALHFADY LACRAAQRAE ASARARDYWL ERLPHLPDAP
ALPLACAPQS IRQPRTRRLA FQLSAGESRR LERLAAQHGV TLSCVFGCAF ALVLARWSET
PEFLLNVPLF DRHADDPRIG EVIADFTTLL LLECRMQAGV SFAEAVKGFQ RTLHGAIDHA
AFPALEVLRE ARRQGQPRSA PVVFASNLGE EGFVPAAFRE VFGDLHDMLS QTPQVWLDHQ
LYRVGDGILL AWDSVVGVFP EGLPETMFEA YVGLLQRLCD SAWEQPAELP LPWAQQARRA
ALNGQPACAT ARTLHRDFFL RAAEAPDADA LLYRDRRVTR GELAEHALRI AGGLREAGVR
PGDAVEVSLP RGPQQVAAVF GVLAAGACYV PLDIDQPPAR RRLIEEAAGV CLAITEEDDP
QALPPRLDLQ RLLRGPALAA PVPLAPQASA YVIYTSGSTG VPKGVEVSHA AAINTIDALL
DLLRVDASDR LLAVSALDFD LSVFDLFGGL GAGASLVLPT QEQARDAAAW AEAIQRHAVS
LWNSAPALLE MALSLPASQA DYRSLRAVLL SGDWVALDLP ARLRPRGSSE CRLHVLGGAT
EAGIWSNLQS VDTVPPHWRS IPYGRPLPGQ AYRVVDAHGR DVPDLVVGEL WIGGASLARG
YRNDPELSAR RFVHDAQGRW YRTGDRGRYW GDGTLEFLGR VDQQVKVRGQ RIELGEVEAA
LCAQAGVESA CAAVLGGGVA SLGAVLVARL APRAEGSMEL PAAQPFAGLA EAEAVLTREI
LGALLEAPLE LDDGLRRRWL DWLADSAASA LPPLDEALRR LGWQAAGLTA MGNALRGLLA
GEQAPAALLL DPWLAPQAVA ARLPDGREAL ARLLEALPTP AAGERLRVAV LDTRAGLWLD
QGMASLLRPG LELTLFERSR VLLDAAATRL PERIAVQALD DGLLPAEHLG RYDRVISFAA
LHAYDASRDG LALAAALLRP QGRLLLVDLL RESPLALLGA ALLDDRPLRL AELPSLLADL
AAAGLAPRCL WRSERIALVE ALAPGLGLDA AALQAGLEQR LPQAMRPERL WCLPSLPLNG
NGKVDRRRLA GSMTRALGEC RDEPSAEEPL EAHEQALADC WEAVLKRPVR RREASFFSLG
GDSLLATRLL AGIRERFGVR LGMADFYRQP TLAGLARHLQ AQTDEIEETQ LEEGVL
|
|---|
| |