| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0872 |
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| Symbol | pchD |
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| ID | 5357907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 856747 |
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| End bp | 858390 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640809926 |
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| Product | pyochelin biosynthesis protein PchD |
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| Protein accession | YP_001346258 |
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| Protein GI | 152987577 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1021] Peptide arylation enzymes |
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| TIGRFAM ID | [TIGR02275] 2,3-dihydroxybenzoate-AMP ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.453067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCCT CGCCCGTCCC TCGAACGGCC GTCGACGACG CCCCCGACTG GCCCGCCGAC
TTCGCTCGCC GCTACATCGC CGCTGGCCAC TGGCAGCAGC AGAGCTTCGC CGAAGCCCTC
GCCGCCAGCG CCGCGCGCCA TCCGCAACGG ATCGCGCTGT GCGCCGACCA GCAGCGCCTC
AGCTACGCCG AGCTGCTGCT GCGCTGTCGC CGCCTGGCTG CCGGCCTGCG CCAGCTCGGT
CTGGCGCGCG GCGACACGGT GGTGCTGCAC CTGCCCAACG GAATCGCCTT CGTCGAGACC
TGCTTCGCCC TGTTCCAGCT CGGCGTGTGC CCGGTACTGG CCCTGCCCGC ACACCGCCAG
CACGAGATCG GCGGCTTCTG CCGCTTCGCC GGGGCCAAGG CCTATATCGG CGCCGAGCGG
ATCGATGGTT TCGACCCGCG GCCGATGGCC GGCGAACTGC TCGCCAGCGG CGCCTGTCGC
ATGGCGCTGA TCCACGGCGA GGCCGAGGCT CCGCTGCAAA CGCTGGCACC GCTGTACCAG
GCGCCGGCGC TGGAGGAATG CGCCGCCCGC GCCGAGGACG TCGCCTGCTT CCAGCTGTCC
GGCGGCACCA CCGGCACGCC GAAGCTGATT CCCCGGCGTC ACCGCGAATA CCTCTACAAC
GTGCGCGCCA GCACCGAGGT CTGCGGCTTC GACGAGCACA CCGTGTACCT TACCGGCCTG
CCGATGGCGC ACAATTTCAC CCTCTGCTGC CCCGGGGTGA TCGGCACCCT GCTGGCCGGC
GGTCGCGTGG TGGTCAGCCA GCGCGCCGAT CCCGAGCACT GCTTCCCGCT GATCGCCCGC
GAACGGGTCA CCCACACCGC CCTGGTGCCA CCGCTGGCGA TGCTCTGGCT GGATGCCCAG
GAAAGCCGCC GCGCCGATCT ATCCAGCCTG CGCCTGCTCC AGGTCGGCGG CTCGAAGCTC
GGCAGCAGTG CCGCGCGGCG CGTCGAACCG GTGCTTGGCT GCCGGCTGCA ACAGGTGCTG
GGAATGGCCG AGGGGCTGAT CTGCTATACC CGCCTGGACG ATCCGCCCGA ACGCGTCCTG
CACACCCAGG GCCGGCCGCT GTCGCCGGAC GACGAGGTGC GGGTGGTCGA TGCTGACGGC
CGCGAGGTCG GCCCCGGCGA GATCGGCGAG CTGACCGTGC GCGGCCCCTA CACCATCCGC
GGCTACTACC GGCTACCCGA GCACAACGCC AAGGCCTTCA GCGCGGACGG TTTCTACCGC
ACCGGCGACC GGGTCAGCCG CGACGCCGAC GGCTACCTGG TGGTGGAAGG CCGCGACAAG
GACCAGATCA ACCGCGGCGG CGAGAAGATC GCCGCGGAGG AAGTGGAGAA CCTGCTGATC
GCCCATCCGC AGGTGCACGA CGCCACCGTG GTGGCGATGC CCGACAGCCT GCTCGGCGAA
CGCACCTGCG CTTTCGTCAT CCCGCGCCAG CCGGCGCCCT CGGCGCTGAA GCTGAAGCAG
TACCTGCACG CCTGCGGACT GGCCGCGTTC AAGGTGCCGG ACCGCATCGA GCTGGTCGCG
GCCTTCCCCC AGACCGGGAT CGGCAAGATC AGCAAGAAGG ACCTGCGCGA GCGCCTGCGC
CGCGAGCTGG AGGCCCGCGC ATGA
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| Protein sequence | MTSSPVPRTA VDDAPDWPAD FARRYIAAGH WQQQSFAEAL AASAARHPQR IALCADQQRL
SYAELLLRCR RLAAGLRQLG LARGDTVVLH LPNGIAFVET CFALFQLGVC PVLALPAHRQ
HEIGGFCRFA GAKAYIGAER IDGFDPRPMA GELLASGACR MALIHGEAEA PLQTLAPLYQ
APALEECAAR AEDVACFQLS GGTTGTPKLI PRRHREYLYN VRASTEVCGF DEHTVYLTGL
PMAHNFTLCC PGVIGTLLAG GRVVVSQRAD PEHCFPLIAR ERVTHTALVP PLAMLWLDAQ
ESRRADLSSL RLLQVGGSKL GSSAARRVEP VLGCRLQQVL GMAEGLICYT RLDDPPERVL
HTQGRPLSPD DEVRVVDADG REVGPGEIGE LTVRGPYTIR GYYRLPEHNA KAFSADGFYR
TGDRVSRDAD GYLVVEGRDK DQINRGGEKI AAEEVENLLI AHPQVHDATV VAMPDSLLGE
RTCAFVIPRQ PAPSALKLKQ YLHACGLAAF KVPDRIELVA AFPQTGIGKI SKKDLRERLR
RELEARA
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