| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0869 |
|---|
| Symbol | pchA |
|---|
| ID | 5358981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 854263 |
|---|
| End bp | 855693 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640809923 |
|---|
| Product | salicylate biosynthesis isochorismate synthase |
|---|
| Protein accession | YP_001346255 |
|---|
| Protein GI | 152983931 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1169] Isochorismate synthase |
|---|
| TIGRFAM ID | [TIGR00543] isochorismate synthases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.81053 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTGCC TGGCCCCCCT GAGCCAGTGC CTGCACGCCT TGCGCGGCAC CTTCGAGCAC
GCCATCGGCC AGGCGCAGGC GCTCGATCGT CCAGTCCTGG TGGCGGCTTC GTTCGAGATC
GACCCGCTGG ACCCACTGCA GGTGTTCGGC GCCTGGGACG ACCGGCAAAC GCCCTGCCTG
TACTGGGAAC AGCCCGAGCT GGCGTTCTTC GCCTGGGGCT GCGCCCTGGA GCTGCAAGGC
CACGGCGAAC AGCGCTTCGC CCGGCTCGAG GACAGCTGGC GGCTGCTCTG CGCCGAGGCG
GTGGTCGAGG GTCCGCTGGC GCCGCGCCTG TGCGGCGGCT TCCGCTTCGA TCCGCGCGGC
CCGCGCCAGG AACACTGGCA GGCCTTCGCC GACGCCAGCC TGATGCTCGC CAGCCTCACC
GTGCTGCGCG AGGGCGATCG CCACCGGGTG CTCTGCCAGC ACCTGGCCAA GCCCGGCGAA
GATGCCCTGG CCCTGGCCGC CTACCACTGC TCGGCGCTGC TGCGCCTGCG CCAGCCGGCC
CGGCGCCGGG CATTGCCGGC GAACGCCGGC GAACAGCAGG ACGCCTCGCC GCTGGAGCGC
CGGCAGTGGG AAGGCAAGGT CGCCGACGCG GTTCACGGCG TGCGCCAGGG ACGCTTCGGC
AAGGTCGTGC TGGCCCGCGC CCAGGTCCAG CCGCTCGGCG AGGTCGAGCC CTGGCAGGTA
CTCGAACAAC TGCGCCTGCG TCACGCCGAG GCCCAGTTGT TCGCCTGTCG GCGCGGCAAC
GCCTGCTTCC TCGGCGCCTC GCCGGAACGC CTGGTGCAGG TGCGCGACGG CGCGCTGCGC
ACCCACGCCC TCGCCGGCAC CACCGCCCGC GGCGGCGACG CCGGGGAAGA CACCCGGCTC
GGCCAGGCGC TGCTCGACAG CGCCAAGGAA AGACACGAGC ACCAACTGGT GGTGGAAGCG
ATCCGCGCGG CCCTGGAGCC CTTCAGCGAA GCGTTGCGGA TCCCCGCGAC GCCCGCCCTG
AAACGACTGG CCCGGGTGCA GCACCTGAAC ACGCCGATCC AGGCTCGCCT GGCCGATGGC
CAGGGCATCC TGCGCCTGGT CGAAGCACTG CATCCGACCC CCGCGGTGGG CGGCTACCCG
CGCAGCGCGG CGCTGGACCA CATCCGCCAG CACGAAGGCA TGGACCGTGG CTGGTACGCC
GCGCCGCTGG GCTGGCTCGA CGGCGAAGGC AACGGCGACT TCCTGGTGGC GCTGCGCTCG
GCTCTGCTCA CTCCGGGCCA GGGCTACCTG TTCGCCGGCT GCGGCCTGGT AGGCGATTCG
GAACCGTCCC ACGAGTACCG CGAAACCTGC CTTAAGCTCA GCGCCATGCA GGACGCCCTG
TCCGCCGCCG GCGGCCTGGG CGAGGCACCG TTGCAACGCG GCGTCGCCTG A
|
|---|
| Protein sequence | MSCLAPLSQC LHALRGTFEH AIGQAQALDR PVLVAASFEI DPLDPLQVFG AWDDRQTPCL
YWEQPELAFF AWGCALELQG HGEQRFARLE DSWRLLCAEA VVEGPLAPRL CGGFRFDPRG
PRQEHWQAFA DASLMLASLT VLREGDRHRV LCQHLAKPGE DALALAAYHC SALLRLRQPA
RRRALPANAG EQQDASPLER RQWEGKVADA VHGVRQGRFG KVVLARAQVQ PLGEVEPWQV
LEQLRLRHAE AQLFACRRGN ACFLGASPER LVQVRDGALR THALAGTTAR GGDAGEDTRL
GQALLDSAKE RHEHQLVVEA IRAALEPFSE ALRIPATPAL KRLARVQHLN TPIQARLADG
QGILRLVEAL HPTPAVGGYP RSAALDHIRQ HEGMDRGWYA APLGWLDGEG NGDFLVALRS
ALLTPGQGYL FAGCGLVGDS EPSHEYRETC LKLSAMQDAL SAAGGLGEAP LQRGVA
|
|---|
| |