| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0717 |
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| Symbol | |
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| ID | 5356286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 717961 |
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| End bp | 721698 |
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| Gene Length | 3738 bp |
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| Protein Length | 1245 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640809771 |
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| Product | hypothetical protein |
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| Protein accession | YP_001346112 |
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| Protein GI | 152987701 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCGTC TGCAGGCCGT GCTCCTCCTG TGTCTGGCCT GCTGCTGGCC AGGGCTGGCC
ACCGCCCTCA CGCTCTCGCC CGAGGAACGG GCCTGGCTGG CCGAACATCC GGAGCTCCGC
CTGGGCATCG GCACCTCCTG GCCGCCCTTC GAATTCCGCG ACGCCCAGGG CCATTACCAA
GGACTGGCCG CCAACTACAT CGCCCTGCTG CAAGAGCGCC TGCGGGTCAG CATGACGCCT
GTGGAGCCAA GGAGCCGGAC ACAGGTCCTC GAGCAGGCCC GGGCCGGCCG GCTCGACCTG
CTGCCCGGCA TCATGGCCAC TCCGGAACGC CAGGAATACC TGACGTTCCC CCGTCCCTAC
CTGGATTTCC CGATCATCAT CCTGGCGCGC AAGAACGGGC CGCTGCCGAA ACGGATCGAC
GAGCTCTACG GGCTCAAGGT CGCGGTGGTG GATCACTACG CCCCCCACGA GCTACTGGTC
GCCCGACACC CGGACCTCAC CCTGCTGCCG CTGCCGTCGG TCGCCGCCGC CCTGCAGGCG
CTGGCCACCG GCCAGGCCGA CGCGTTCGTC GGCGACTTCG CCTCCAGCGT GTGGAACCTG
CGCCAGCTCA AGCTCAGCGG CCTGGAGATC AGCGGCGAGA CGCCCTACCG CTACCAACTG
GCGATGGCCG TGCCGCGCGG CGAGCCGATC CTCGCCGGGA TCATCGACAA GGTGTTCGCC
GACCTCCGCG CCGAGGAAAT CGATCGGCTC CAGGCGCCCT GGGTCGGCGG CCTGCTCGAC
CGGCGGCCGG CCTGGGGCGC GCTGGCCCGC TACGGCATTC CTGTCGCCCT GCTGATCCTG
GTTTCGGTCG CCGTGCTGCT GGCCATGAAC CGCCGCCTGC GCCGCGAGGT AAGCCGGCGC
CGCCAGCTGG AACAGGACCT GCGCGACAGC GAGCAGCACT ACCGCGGCCT GGTGGAGAGC
CTGAACGCCA TCGCCTGGGA GATGCGCCTG ACGGAAAACC GCTTCACCTA TGTCTCGCCA
CATGCCGAGC GCCTGCTCGG CTATCCCCTG GCCGAGTGGC TGGAGCCAGG CTTCTGGCAA
CGCACCCTGC ACCCCGACGA CGCCGAACAC GCCATCGACT ACTGCCTGAG CGAAAGCCAG
GCCGGCCGCG ACCACAGTTT CGACTACCGG ATGCTCGCCG CCGACGGCCG GGTGGTGTGG
ATCCGCGACC TGGTCACACT GATCGGGCAG GGCCATGAGC TGCTCCTGCG CGGCCTGATG
ATCGACATCA CCGAGACCAA GCACACCGAA CAGGCCCTGC GCCTGTCCGA GCAGAAATTC
GCCTCGGTGT TCCACCACTG CCCGGACATG GTGGTGCTGG CCAACGGCGC CGATGGCCGC
TTCCTCGCGG TGAACAGCAC CTTCGAGCAG CAGATCGGCA TCGCCGCCAC GGAGGCTCTC
GGCAAGACCG CCACCGAACT GGGCATCTGG GGCGCCCCCG GGCTCGGCCC GCAGGTACTG
GAAAAACTCG CCCAGGGCAA CCTCGCCAAC CTCGAGGTAC CGCTGCGGCG CCGTGACGGC
GATACCTTCA GTGCCCTGCT CAGCGCCCAG CACGTGACCC TCGACCAGCG CCCGGCGCTG
GTGGTGGTGA TCCGCGACAT CACCCGCCTG CTGGAGACCC AGGAGCTGCT ACGGATCTCC
GAGGAAAAAT TCGCCAACGC CTTTCACGCC TCGCCCGACG GTCTGCTGAT CAGCCGCCTG
GAGGACGGCA CGCTGATCGA CGTCAACGAA GGCTTCAGCC GCCTCACCGG CTACCGCCGC
GACGAAGTCA CTTCGCGCTC GACCCTCGAA CTCGGCCTGT GGGTCGACCC CGAGGACCGC
AAGCGCCTGA TGTCGCTGGT GCGCCACCAT ACTCTGACCC AGGGTTTCAC CGCCCCCGTA
CTGATCCGCA ACGGCAGCAT CCGCCAATGC GAAATGTCCG CCCACCAGAT CAGCATCGGC
GGCGAGGACT GCGTGCTGAC CATCGCCCGC GACGTCACCG AGCGCCAGCT CATGGAGGAA
AAGTTGCAGC AGGCCGCCAC CGTCTTCGAA AGCACCGCCG AAGGGGTGAT GATCACCGAT
ACCCGCCAGC GCATCACCGC GGTCAACCGC GCCTTCAGCG AGATCACCGG CTACAGCGAG
CAGGAAGCCC TCGGCCAGTC GCCGCGCCTG CTCTCCTCCG GGCAGCACGA CCGTGCCTTC
TACCTGGCCA TGTGGAACCA GTTGGAACGC GAGGGCCATT GGCAGGGCGA GATCTGGAAC
CGGCGCAAGA CCGGCGAGCT GTATCCCGAG TGGCTGACCA TCAGCGCGGT GCACAATCCG
CAGGGCGAGA TCACCCATTT CGTCGGGGTC TTCGCCGATA TCTCCACCCT CAAGTACGCC
CAGGCGCGGC TCGACTACCA GGCCCACCAC GACCCGCTCA CCGGCCTGCC CAACCGCCTG
CTGTTCGAGC ACCGCCTTGA CCACGCCCTC GACGAGGCGC GCGAGGAAAG CCGTCCCGGC
GCCGTGCTGT TCATCGATCT GGACCGCTTC AAGCACATCA ACGACAGCCT CGGCCACCCC
ACCGGCGACC TGCTGCTCAA GGCCATCGCC GAGCGCCTGC GCGACCAGTT GCGCGATGTC
GATACCGTAG CCCGGCTGGG CGGCGACGAA TTCATCATCC TGCTCCCCGG CCTGCACCAG
GAAAGCGATG CCGAGCATGT CGCACGCAAG CTGCTGAACG CCTTCACCGC GCCATTCCAG
GCCGATGGCC ATGAGTTCTT CGTCAGCGCC AGCATCGGCA TCGCCCTGTT CCCCAAGGAC
GGCGACGACG CGCCGACCCT GGTGAAGAAC GCCGACGCCG CCATGTACCG CGCCAAGTCC
CGCGGGCGCA GCCGCATCGA GTACTACACC CGCGAGCTGA CCTTCCTGGC CACCGAACGC
ATGGCCCTGG AAACCGAACT GCGTCGCGCC CTCGAACGCG ACGAACTGCT GCTCTACTAC
CAGCCCAAGC TGAGCCTGGA AAGCGGCCTG CTGGTCGGCG CCGAAGCGCT GGTGCGCTGG
CACCACCCCT TGTTCGGGGA AATTTCCCCG GAACGCTTCA TCCCCCTCGC CGAGGATTGC
GGACTGATCC TGCCCCTCGG CGACTGGGTG CTGGAACATG CCTGCCAGCA GATGGGCGAC
TGGCAGAAGC TGCACGCACC GTTCGGCCCG CTGTCGGTGA ACCTCGCCGG CGCCCAGCTC
GGCCAGCCGC AACTGATCGA GCGCCTCCGC CAGTTGCTGG CACAGTCCGG CCTGGAGCCC
TCGCGGCTGC AACTGGAGAT CACCGAAAGC TTCATCATGA ACCAGACCGA GGAAGCCCTC
GGCGTGCTCC GCGGCCTCAA GGATCTCGGC GTACAACTGG CGATCGACGA CTTCGGCACC
GGCTACTCCT CGCTCAGCTA CCTCAAGCGC CTGCCGCTGG ATATCCTGAA GATCGACAAG
TCGTTCATCC GCGGCCTTCC CGACGACCCC CACGACGCCG CCATCACCCG CGCCATCATC
GCCCTCGGCC GCAGCATGCA GCTCACGGTG ATCGCCGAAG GGGTGGAAAC CGAGGGCCAG
CAGAGCTTCC TCACCCACGA AGGCTGCGAG CAGATCCAGG GCTTCGTCCT CAGCCCGCCG
CTGCCCGCCG AGCTGTTCGC CAGCAAGTTC CTCAAACCGC GCCAGCCGAT TGGCGCTCCC
CGCGAAGCGC CGGTATAA
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| Protein sequence | MQRLQAVLLL CLACCWPGLA TALTLSPEER AWLAEHPELR LGIGTSWPPF EFRDAQGHYQ
GLAANYIALL QERLRVSMTP VEPRSRTQVL EQARAGRLDL LPGIMATPER QEYLTFPRPY
LDFPIIILAR KNGPLPKRID ELYGLKVAVV DHYAPHELLV ARHPDLTLLP LPSVAAALQA
LATGQADAFV GDFASSVWNL RQLKLSGLEI SGETPYRYQL AMAVPRGEPI LAGIIDKVFA
DLRAEEIDRL QAPWVGGLLD RRPAWGALAR YGIPVALLIL VSVAVLLAMN RRLRREVSRR
RQLEQDLRDS EQHYRGLVES LNAIAWEMRL TENRFTYVSP HAERLLGYPL AEWLEPGFWQ
RTLHPDDAEH AIDYCLSESQ AGRDHSFDYR MLAADGRVVW IRDLVTLIGQ GHELLLRGLM
IDITETKHTE QALRLSEQKF ASVFHHCPDM VVLANGADGR FLAVNSTFEQ QIGIAATEAL
GKTATELGIW GAPGLGPQVL EKLAQGNLAN LEVPLRRRDG DTFSALLSAQ HVTLDQRPAL
VVVIRDITRL LETQELLRIS EEKFANAFHA SPDGLLISRL EDGTLIDVNE GFSRLTGYRR
DEVTSRSTLE LGLWVDPEDR KRLMSLVRHH TLTQGFTAPV LIRNGSIRQC EMSAHQISIG
GEDCVLTIAR DVTERQLMEE KLQQAATVFE STAEGVMITD TRQRITAVNR AFSEITGYSE
QEALGQSPRL LSSGQHDRAF YLAMWNQLER EGHWQGEIWN RRKTGELYPE WLTISAVHNP
QGEITHFVGV FADISTLKYA QARLDYQAHH DPLTGLPNRL LFEHRLDHAL DEAREESRPG
AVLFIDLDRF KHINDSLGHP TGDLLLKAIA ERLRDQLRDV DTVARLGGDE FIILLPGLHQ
ESDAEHVARK LLNAFTAPFQ ADGHEFFVSA SIGIALFPKD GDDAPTLVKN ADAAMYRAKS
RGRSRIEYYT RELTFLATER MALETELRRA LERDELLLYY QPKLSLESGL LVGAEALVRW
HHPLFGEISP ERFIPLAEDC GLILPLGDWV LEHACQQMGD WQKLHAPFGP LSVNLAGAQL
GQPQLIERLR QLLAQSGLEP SRLQLEITES FIMNQTEEAL GVLRGLKDLG VQLAIDDFGT
GYSSLSYLKR LPLDILKIDK SFIRGLPDDP HDAAITRAII ALGRSMQLTV IAEGVETEGQ
QSFLTHEGCE QIQGFVLSPP LPAELFASKF LKPRQPIGAP REAPV
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