Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0578 |
Symbol | |
ID | 5357085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 598258 |
End bp | 598776 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640809632 |
Product | RNA polymerase sigma factor |
Protein accession | YP_001345973 |
Protein GI | 152987247 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGGCGG GTGAAGTCAG CAACAGCGAA TTCGTGGGTA GCCTGTACCG GGACCACCGC GGCTGGCTGC TCGCCTGGCT GAACCGCAAC CTCGGCTGCC GCCAGCGCGC CGAAGACCTC AGCCAGGACA CCTTCGTCCG CCTCCTCGGC CGCCCGGAGC TGCCCGGCCT GCGCGAACCG CGTGCGTTCC TGGCGAAGGT GGCGCGCGGC CTGCTGATCG ACCACTTCCG CCGCGCCGCC CTGGAGCAGG CCTATCTCGC CGAACTGGCG CTGGTTCCGG AAGCGGAGCA GCCTTCGGCC GAAGAGCGGT ACCTGATCCT CGAGGACCTG CGCGAGATCG ACCGCCTGCT CGGCACGCTG TCGCTGAAGG CGCGCAGCGC GTTCCTCTAC AACCGCCTGG ACGGCATGCC CCACGCCGAG ATCGCCGAGC GTCTCGGGGT CTCGGTGCCG CGCGTGCGCC AGTACCTGGC CCAGGGCCTG CGCCAGTGCT ACATCGCCCT CTACGGGGAA CCGCGATGA
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Protein sequence | MAAGEVSNSE FVGSLYRDHR GWLLAWLNRN LGCRQRAEDL SQDTFVRLLG RPELPGLREP RAFLAKVARG LLIDHFRRAA LEQAYLAELA LVPEAEQPSA EERYLILEDL REIDRLLGTL SLKARSAFLY NRLDGMPHAE IAERLGVSVP RVRQYLAQGL RQCYIALYGE PR
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