Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0535 |
Symbol | |
ID | 5358012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 551320 |
End bp | 553512 |
Gene Length | 2193 bp |
Protein Length | 730 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640809589 |
Product | hypothetical protein |
Protein accession | YP_001345930 |
Protein GI | 152989131 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAGC ACTCCACGGC CCGCCGCGTC CTCGCGCTGG GTCTCAACCT CACCCTGGCC GGCGTTCCGG CCTTGCTCTG GGCCGATGAG GAACCCACCG AACTGCCCGC CCTCACCGTC AGCGCCGGCG CCGCCGGGGA AACCCCGCCG GCCCTCGATC TCGACGACAG CGCCGGCGGC GGCTCGCGCC TGGGCCTGAG CCTGCGCGAG ACTCCCGGCT CGGTAAGCGT GGCCAACCGT GCCAGCTTCG AGCGGCGCGG CCTGCGCAGC ACCCAGGACA TCGCCAACAG CCTGCCCGGC GTGAACGCCT CGGCGCCGCC CGGCTTCGGC GGCTTCGTCA CCTACCGCGG CTTCAGCTCG AACCAGGTCA ACCAGTTGTT CAACGGCATT CCGGTGCAAT ACAGCAGCGC CATGCGTCCG CTGGACGACT GGATCGTCGA CCGCGTCGAG CTGGTCGGCG GTCCGTCCTC CTTCCTCAAC GGCGCCGGTG CCGTCGGCGG CTCGCTGGAC TACATCAGCA AGCTCGCCGA CCGCTACGGC GATTTCATGG AAGGCCGGGT GCGCTACGGC AGCTACGACG ATTCGGAAGT CGCCTTCGGC TTCAACCAGG CCCTGGGCAT CGGCCCCGAG CCGAAGCACT TCGTGCGCCT GGACGTCAGC CGCAGCGGCG GCAACGGCTA CGTCGACCGC AATTCGCGCG AATCGTGGAA CGTCGCTTTC TCCCTGCTCA GCGACCTGAC CCCGGACCTT TCCCACACCC TGGCCCTGGA GTACCAGGAC GAGCAGGAAG ACAGCCCCTA CTGGGGCACG CCGGTGCTCA ATCCCTACGC CGGCGAGCTG AAGATCGACA AGAGCCGTCG CCGCGAGAAC TACAACGTCG CCGATGGCCG CTACGAACAG CGCGTGCGCT GGCTGCGTTC GATCCTCGAG TACCGGGTCA GCGATAGCAC GCGCTGGCGC AACACCTTCT ACCACTACGA CGCCGAGCGC GATTACCGCA ACCTCGAGAC CTATCGCTAC AACGCCGACA ACAGCGGGGT GGTGCGCTCC AACGCATTCC TCCAGCGCCA CGACCAGCAG CTCGACGGCA ACCGCTTCGA GCTGCAGCAC AGCCAGCCGC TGTTCGGACT GGCCAGCGAC TGGGCGCTGG GCTTCGACTA CAGCATCAAC AAGCAGACGC GCTTCCCGAG TACCGCCTCC GGGCCGTTCG GTACGGTCGA TCCGGCCAGT TTCGAGCCGG GCCACTTCTA CGACCTGCCG GGCATGCGTC CCGGCCACCG GAAGGACCGC AGCAACGAGG TGCGCACCAG CGCGTTGTTT GCCGAGAACC GCCTGGGCCT GACCGACGAG CTGTCGCTGG TCACCGGGCT GCGCTACGAC CACCTCGACC TCGACGTGCG CAACCATCGG GTGCCCGACA AGGACAATCC CGCACACTTC GAACGGCGCT GGGACGTGCT CACCGGGCGC GCCGGGCTGG TCTACCAGTT CACTCCGCAC GCCAACGTCT ACCTGCAATA CAGTACCGCC GCCGACCCGC CGGGCGGGGT GCTGACCAGC GCCAGCTTCG CCCAGGTCCG TGACTACGAC CTGTCCACCG GCGACCAGTG GGAGCTGGGC AGCAAGTTCG ATTTCCTCGA CGGTCGCGGC AGCGCCACCC TGGCCGCCTA CCGCATCGTC CGCCGGGATT TCTCGGTGGC CGACCCGAAC GACCCCAACC TCAGCGTGCC GGTGGGCCAG CAGACCTCCA GGGGCATCGA GGCCGCCGCC TCCCTGCGGA TCACTCCGAA GCTGCTGGTC GAGGGCAACT TCGCCTGGGT CGACGCGCAG TACGACGAGT TCACCGAGAA CGTCGGCGGC GTCGCCGTCT CGCGCAAGGG CAAGACGCCG CCGAACGTGC CGGAGCGGGT CGGCAACCTG TGGCTGACCT ACGACTTCGA CCCGGCCTGG CAGGGCGGGG TGGACGCGCG CTACGTGTCC TCGGTGTACG CCAACAACGC CAACACCTGG CACGTGCCGT CCTATACGGT CTACGGGACT TTCCTCAGCT ACCGGCTGGA CGAGCGCACG CGCATCACCG GGCGCGTGCG CAACCTCACC GACGAGGTCT ACGCACGTTT CGTGCAGAGC ACGCCGCTGT ACTACGTCGG CGACCCGCGG ACCTTCGAAC TGAGCGTGCA GACGCGTTTC TGA
|
Protein sequence | MKKHSTARRV LALGLNLTLA GVPALLWADE EPTELPALTV SAGAAGETPP ALDLDDSAGG GSRLGLSLRE TPGSVSVANR ASFERRGLRS TQDIANSLPG VNASAPPGFG GFVTYRGFSS NQVNQLFNGI PVQYSSAMRP LDDWIVDRVE LVGGPSSFLN GAGAVGGSLD YISKLADRYG DFMEGRVRYG SYDDSEVAFG FNQALGIGPE PKHFVRLDVS RSGGNGYVDR NSRESWNVAF SLLSDLTPDL SHTLALEYQD EQEDSPYWGT PVLNPYAGEL KIDKSRRREN YNVADGRYEQ RVRWLRSILE YRVSDSTRWR NTFYHYDAER DYRNLETYRY NADNSGVVRS NAFLQRHDQQ LDGNRFELQH SQPLFGLASD WALGFDYSIN KQTRFPSTAS GPFGTVDPAS FEPGHFYDLP GMRPGHRKDR SNEVRTSALF AENRLGLTDE LSLVTGLRYD HLDLDVRNHR VPDKDNPAHF ERRWDVLTGR AGLVYQFTPH ANVYLQYSTA ADPPGGVLTS ASFAQVRDYD LSTGDQWELG SKFDFLDGRG SATLAAYRIV RRDFSVADPN DPNLSVPVGQ QTSRGIEAAA SLRITPKLLV EGNFAWVDAQ YDEFTENVGG VAVSRKGKTP PNVPERVGNL WLTYDFDPAW QGGVDARYVS SVYANNANTW HVPSYTVYGT FLSYRLDERT RITGRVRNLT DEVYARFVQS TPLYYVGDPR TFELSVQTRF
|
| |