| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0527 |
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| Symbol | oprM |
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| ID | 5355052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 542706 |
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| End bp | 544163 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640809581 |
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| Product | outer membrane protein OprM precursor |
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| Protein accession | YP_001345922 |
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| Protein GI | 152985622 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.71666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGGT CCTTCCTTTC CCTGGCGGTA GCCGCTGTCG TTCTGTCCGG CTGCTCGCTG
ATTCCCGACT ACCAGCGCCC CGAGGCGCCG GTAGCCGCGG CCTACCCGCA AGGGCAGGCC
TACGGGCAGA ACACCGGCGC GGCGGCCGTT CCGGCCGCCG ACATCGGCTG GCGCGAGTTC
TTCCGCGACC CGCAGTTGCA GCAGCTGATC GGCGTGGCGC TGGAAAACAA CCGCGACCTG
CGCGTCGCCG CGCTGAACGT CGAGGCCTTC CGCGCGCAGT ACCGCATCCA GCGGGCCGAC
CTGTTCCCGC GGATCGGCGT GGATGGCAGC GGTACCCGCC AGCGCCTGCC CGGTGACCTG
TCGACCACCG GCAACCCGGC GATCTCCAGC CAGTACGGGG TGACCCTGGG CACTACCGCC
TGGGAGCTCG ATCTCTTCGG CCGCCTGCGC AGCCTGCGCG ACCAGGCCCT GGAGCAGTAC
CTGGCGACCG AACAGGCGCA GCGCAGCGCG CAGACCACCC TGGTGGCCAG CGTGGCGACC
GCCTACCTGA CGCTGAAAGC CGACCAGGCG CAGCTGCAAC TGACCAGGGA CACCCTGGGC
ACTTACCAGA AGAGTTTCGA CCTGACCCAG CGCAGCTATG ACGTCGGCGT CGCCTCCGCG
CTCGACCTGC GCCAGGCGCA GACCGCCGTG GAAGGCGCCC GGGCGACCCT GGCGCAGTAC
ACCCGCCTGG TGGCCCAGGA CCAGAACGCG CTGGTCCTGC TGCTGGGTTC CGGGATCCCG
GCGAACCTGC CGCAAGGCCT GGGCCTGGAC CAGACCCTGC TGACCGAAGT GCCGGCGGGC
CTGCCGTCTG ACCTGCTGCA GCGGCGTCCG GACATCCTCG AGGCCGAGCA CCAGCTCATG
GCCGCCAACG CCAGCATCGG CGCCGCGCGC GCGGCGTTCT TCCCGAGCAT CAGCCTGACC
GCCAACGCCG GCACCATGAG CCGCCAGTTG TCCGGCCTGT TCGACGCCGG TTCGGGGTCC
TGGCTGTTCC AGCCGTCGAT CAACCTGCCG ATCTTCACCG CCGGCAGCCT GCGCGCCAGC
CTGGACTACG CGAAGATCCA GAAGGACATC AACGTCGCGC AGTACGAGAA GGCGATCCAG
ACGGCGTTCC AGGAAGTCGC CGACGGCCTG GCCGCGCGCG GCACCTTCAC CGAGCAGTTG
CAGGCACAGC GCGACCTGGT CAAGGCCAGC GACGAGTACT ACCAGCTCGC CGACAAGCGC
TATCGCACGG GTGTGGACAA CTACCTGACC CTGCTCGACG CGCAACGCTC GCTGTTCACC
GCGCAGCAGC AACTGATCAC CGACCGCCTC AACCAGCTGA CCAGCGAGGT CAACCTGTAC
AAGGCCCTCG GCGGCGGCTG GAACCAGCAG ACCGTGACCC AGCAGCAGAC CGCGAAGAAG
GAAGATCCGC AGGCCTGA
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| Protein sequence | MKRSFLSLAV AAVVLSGCSL IPDYQRPEAP VAAAYPQGQA YGQNTGAAAV PAADIGWREF
FRDPQLQQLI GVALENNRDL RVAALNVEAF RAQYRIQRAD LFPRIGVDGS GTRQRLPGDL
STTGNPAISS QYGVTLGTTA WELDLFGRLR SLRDQALEQY LATEQAQRSA QTTLVASVAT
AYLTLKADQA QLQLTRDTLG TYQKSFDLTQ RSYDVGVASA LDLRQAQTAV EGARATLAQY
TRLVAQDQNA LVLLLGSGIP ANLPQGLGLD QTLLTEVPAG LPSDLLQRRP DILEAEHQLM
AANASIGAAR AAFFPSISLT ANAGTMSRQL SGLFDAGSGS WLFQPSINLP IFTAGSLRAS
LDYAKIQKDI NVAQYEKAIQ TAFQEVADGL AARGTFTEQL QAQRDLVKAS DEYYQLADKR
YRTGVDNYLT LLDAQRSLFT AQQQLITDRL NQLTSEVNLY KALGGGWNQQ TVTQQQTAKK
EDPQA
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