| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0526 |
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| Symbol | mexB |
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| ID | 5356306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 539564 |
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| End bp | 542704 |
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| Gene Length | 3141 bp |
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| Protein Length | 1046 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640809580 |
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| Product | RND multidrug efflux transporter MexB |
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| Protein accession | YP_001345921 |
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| Protein GI | 152989597 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAAGT TTTTCATTGA TAGGCCCATT TTCGCGTGGG TGATCGCCTT GGTGATCATG
CTCGCGGGCG GCCTGTCGAT CCTCAGTCTG CCGGTCAACC AGTACCCGGC CATCGCCCCG
CCGGCCATCG CCGTGCAGGT GAGCTACCCG GGCGCCTCGG CCGAGACGGT GCAGGACACC
GTGGTCCAGG TGATCGAGCA GCAGATGAAC GGGATCGACA ATCTGCGCTA CATCTCCTCG
GAGAGTAACT CCGACGGCAG CATGACCATC ACCGTGACCT TCGAGCAGGG CACCGACCCC
GACATCGCCC AGGTCCAGGT GCAGAACAAG CTGCAACTGG CGACCCCGCT GCTGCCGCAG
GAAGTTCAGC GCCAAGGCAT CCGGGTGACC AAGGCGGTGA AGAACTTCCT CATGGTGGTC
GGTGTGGTTT CCACCGACGG CAGCATGACC AAGGAAGACC TGTCGAACTA CATCGTCTCC
AACATCCAGG ACCCGCTGTC GCGGACCAAG GGCGTCGGTG ACTTCCAGGT GTTCGGTTCG
CAGTACTCGA TGCGCATCTG GCTCGACCCG GCCAAGCTGA ACAGCTACCA GCTGACCCCC
GGCGACGTGA GTGCGGCGAT CCAGGCGCAG AACGTGCAGA TTTCCTCCGG CCAGCTCGGC
GGCCTGCCGG CGGTCAAGGG CCAGCAGCTC AACGCCACCA TCATCGGCAA GACCCGCCTG
CAGACCGCGG AGCAGTTCGA GAAGATCCTG CTCAAGGTCA ATCCCGACGG TTCCCAGGTG
CGTCTGAAGG ACGTCGCCGA CGTCGGCCTG GGCGGCCAGG ACTACAGCAT CAACGCGCAG
TTCAACGGCA GCCCGGCGTC CGGTATCGCG ATCAAGCTGG CCACCGGCGC CAACGCGCTG
GATACCGCCA AGGCGATCCG CCAGACCATC GCCAACCTGG AACCGTTCAT GCCGCAGGGC
ATGAAGGTGG TCTACCCGTA CGACACCACC CCGGTGGTCT CGGCCTCGAT CCATGAGGTA
GTGAAGACCC TCGGCGAGGC GATCCTCCTC GTGTTCCTGG TGATGTACCT GTTCCTGCAG
AACTTCCGCG CCACGCTGAT CCCGACCATC GCCGTGCCGG TGGTACTGCT GGGGACCTTC
GGCGTGCTCG CCGCGTTCGG CTTCTCGATC AACACCCTGA CCATGTTCGG CATGGTGCTG
GCCATCGGCC TGCTGGTGGA CGACGCCATC GTGGTGGTGG AGAACGTCGA GCGGGTGATG
GCCGAGGAAG GCCTGTCGCC AAGGGAGGCG GCGCGCAAGT CCATGGGCCA GATCCAGGGC
GCGCTGGTCG GCATCGCCAT GGTGCTCTCG GCGGTATTCC TGCCGATGGC GTTCTTCGGC
GGTTCCACCG GGGTGATCTA CCGGCAGTTC TCCATCACCA TCGTGTCGGC CATGGCCCTC
TCGGTGATCG TGGCGCTGAT CCTCACCCCG GCGCTGTGCG CGACCATGCT CAAGCCGATC
GAGAAAGGCG ATCACGGCGA GCACAAGGGC GGCTTCTTCG GCTGGTTCAA CCGGATGTTC
CTGTCCACCA CCCACGGCTA CGAGCGTGGC GTGGCGTCGA TCCTCAAGCA TCGCGCGCCG
TACCTGCTGA TCTACGTGGT GATCGTGGCC GGGATGATCT GGATGTTCAC CCGCATTCCC
ACCGCGTTCC TCCCCGACGA AGACCAGGGC GTACTCTTCG CCCAGGTACA GACCCCGCCG
GGCTCCACCG CCGAGCGTAC CCAGGTGGTG GTGGACTCGA TGCGCGAATA CCTGCTGGAG
AAGGAAAGCT CTTCGGTCAG CTCGGTGTTC ACCGTCACCG GCTTCAACTT CGCCGGCCGC
GGCCAGAGTT CGGGCATGGC CTTCATCATG CTCAAGCCCT GGGAAGAGCG TCCCGGTGGC
GAGAACAGCG TGTTCGAACT GGCCAAGCGC GCGCAGATGC ACTTCTTCAG CTTCAAGGAC
GCGATGGTGT TCGCCTTCGC TCCGCCGTCG GTACTGGAAC TGGGTAACGC CACCGGTTTC
GACCTGTTCC TCCAGGACCA GGCGGGCGTC GGCCACGAAG TCCTGCTCCA GGCGCGCAAC
AAGTTCCTCA TGCTCGCCTC GCAGAACCCT GCGCTGCAGC GTGTGCGCCC CAACGGCATG
AGCGACGAAC CGCAATACAA GCTGGAGATC GACGACGAGA AGGCCAGCGC CCTCGGCGTG
TCCCTGGCCG ACATCAACAG CACGATATCG ATCGCCTGGG GTTCCAGCTA CGTCAACGAC
TTCATCGACC GTGGCCGGGT CAAGCGGGTC TACCTGCAGG GCAGGCCGGA CGCGCGGATG
AATCCGGACG ACCTGAGCAA GTGGTACGTG CGCAACGACA AGGGCGAGAT GGTGCCGTTC
AACGCCTTCG CCACCGGCAA GTGGGAGTAC GGCTCGCCGA AGCTGGAGCG CTACAACGGC
GTGCCGGCCA TGGAAATCCT CGGCGAGCCG GCGCCCGGCC TGAGTTCCGG TGACGCGATG
GCGGCGGTCG AGGAGATCGT CAAGCAACTG CCGAAAGGCG TGGGCTACTC CTGGACCGGC
CTGTCCTACG AGGAACGTCT GTCCGGCTCG CAGGCGCCGG CGCTGTACGC GCTGTCCCTG
CTGGTGGTGT TCCTCTGCCT GGCGGCGCTC TATGAAAGCT GGTCGATTCC GTTCTCGGTG
ATGCTGGTGG TGCCGTTGGG CGTGATCGGC GCGCTGCTGG CGACCTCCAT GCGCGGACTG
TCCAACGACG TGTTCTTCCA GGTGGGCCTG TTGACGACCA TCGGCCTGTC GGCGAAGAAC
GCCATCCTCA TCGTGGAGTT CGCCAAGGAG CTGCACGAGC AGGGCAAGGG TATCGTCGAG
GCGGCCATCG AGGCCTGCCG CATGCGTCTG CGGCCGATCG TGATGACCTC CCTGGCGTTC
ATCCTCGGCG TGGTGCCGCT GGCCATCTCC ACCGGCGCCG GCTCCGGCAG CCAGCATGCG
ATCGGTACCG GCGTGATCGG CGGCATGGTC ACCGCGACCG TCCTGGCGAT CTTCTGGGTA
CCGCTGTTCT ACGTGGCGGT CAGCACGCTG TTCAAGGACG AGGCGTCCAA GCAGCAGGCT
GAGGCCGAAA AGGGGCAATG A
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| Protein sequence | MSKFFIDRPI FAWVIALVIM LAGGLSILSL PVNQYPAIAP PAIAVQVSYP GASAETVQDT
VVQVIEQQMN GIDNLRYISS ESNSDGSMTI TVTFEQGTDP DIAQVQVQNK LQLATPLLPQ
EVQRQGIRVT KAVKNFLMVV GVVSTDGSMT KEDLSNYIVS NIQDPLSRTK GVGDFQVFGS
QYSMRIWLDP AKLNSYQLTP GDVSAAIQAQ NVQISSGQLG GLPAVKGQQL NATIIGKTRL
QTAEQFEKIL LKVNPDGSQV RLKDVADVGL GGQDYSINAQ FNGSPASGIA IKLATGANAL
DTAKAIRQTI ANLEPFMPQG MKVVYPYDTT PVVSASIHEV VKTLGEAILL VFLVMYLFLQ
NFRATLIPTI AVPVVLLGTF GVLAAFGFSI NTLTMFGMVL AIGLLVDDAI VVVENVERVM
AEEGLSPREA ARKSMGQIQG ALVGIAMVLS AVFLPMAFFG GSTGVIYRQF SITIVSAMAL
SVIVALILTP ALCATMLKPI EKGDHGEHKG GFFGWFNRMF LSTTHGYERG VASILKHRAP
YLLIYVVIVA GMIWMFTRIP TAFLPDEDQG VLFAQVQTPP GSTAERTQVV VDSMREYLLE
KESSSVSSVF TVTGFNFAGR GQSSGMAFIM LKPWEERPGG ENSVFELAKR AQMHFFSFKD
AMVFAFAPPS VLELGNATGF DLFLQDQAGV GHEVLLQARN KFLMLASQNP ALQRVRPNGM
SDEPQYKLEI DDEKASALGV SLADINSTIS IAWGSSYVND FIDRGRVKRV YLQGRPDARM
NPDDLSKWYV RNDKGEMVPF NAFATGKWEY GSPKLERYNG VPAMEILGEP APGLSSGDAM
AAVEEIVKQL PKGVGYSWTG LSYEERLSGS QAPALYALSL LVVFLCLAAL YESWSIPFSV
MLVVPLGVIG ALLATSMRGL SNDVFFQVGL LTTIGLSAKN AILIVEFAKE LHEQGKGIVE
AAIEACRMRL RPIVMTSLAF ILGVVPLAIS TGAGSGSQHA IGTGVIGGMV TATVLAIFWV
PLFYVAVSTL FKDEASKQQA EAEKGQ
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