Gene PSPA7_0496 details

Gene Information

• Locus tag: PSPA7_0496
• Symbol: pilU
• ID: 5357449
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 504185
• End bp: 505348
• Gene Length: 1164 bp
• Protein Length: 387 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640809550
• Product: twitching motility protein PilU
• Protein accession: YP_001345891
• Protein GI: 152989146
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG5008] Tfp pilus assembly protein, ATPase PilU
• TIGRFAM ID: [TIGR01420] pilus retraction protein PilT

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCGAGA ACATCATGGA ATTCGAAAAG CTGCTGCGCC TGATGGTGGA GAAAGGCGGC 
TCCGACCTGT TCATCACCGC CGGCGTGCCG CCGTCGATGA AGGTCAACGG TCGGGTGATG 
CCGGTGACCA AGACCCCGCT GTCGCCGGAG CAGACCCGCG AGACCGTGCT CGGCGTGATG 
AACGAGCAGC AGCGCCGCGA TTTCGCCGAG AACCACGAGT GCAACTTCGC CATCAGCGCC 
CGCGGCATCG GCCGCTTCCG GGTCAGCGCC TTTTACCAGC GCAACCTGGT GGGCATGGTG 
CTGCGCCGGA TCGAGACCAA CATTCCCACC CTGGACGAGC TGAAGCTCCC GGAAATCCTC 
AAGAAGCTGG CGCTGACCAA GCGCGGCCTG GTGATCTTCG TCGGCGCCAC CGGCACCGGC 
AAGTCCACTT CGCTGGCGGC GATGATCGGC TACCGCAACA AGAACTCCAC CGGGCACATC 
ATCTCCATCG AGGACCCGAT CGAATACATC CACCAGCACC AGGGCTGCAT CGTCACCCAG 
CGCGAGGTGG GGCTGGATAC CGACTCCTTC GAGGTGGCGC TGAAGAACAC CCTGCGCCAG 
GCACCGGACG TGATCATGAT CGGCGAGGTG CGCTCGCGGG AGACCATGGA CCACGCCGTG 
GCCTTCGCCG AGACCGGCCA CCTGTGCCTG GCGACGTTGC ACGCGAACAA CGCCAACCAG 
GCGCTGGAGC GGATCATCCA CTTCTTCCCG GCCGACCGTC ATGGCCAGGT GTGGATGGAC 
CTGTCGCTGA ACCTCAAGGC GATCGTCGCC CAGCAACTGG TGCCGACCCC CGACGGCAAG 
GGGCGGCGGG CGGTGATCGA GGTGCTGCTG AACACCCCGC TGGCCGCCGA CCTGATCCGC 
AAGGGCGAGG TGCACGAGCT CAAGCCGCTG ATGAAGCGCT CCACCGAGCA AGGCATGCAG 
ACCTTCGACC AGGCGCTGTA CCAGCTCTAC ACCCAGGGCG AGATCACCTA CGAGGACGCC 
CTGGCCCACG CCGACTCGGC CAACGACCTG CGGCTGATGA TCAAGCTCGG TTCGGAAAGC 
GACGCCGACC ATCTGTCGAG CATGACCCAG GGCCTGAGCC TGGAGATCAC CGACGACGAC 
CCGGCCGGTC GGCGCTTCCG CTGA 

 

Protein sequence

MSENIMEFEK LLRLMVEKGG SDLFITAGVP PSMKVNGRVM PVTKTPLSPE QTRETVLGVM 
NEQQRRDFAE NHECNFAISA RGIGRFRVSA FYQRNLVGMV LRRIETNIPT LDELKLPEIL 
KKLALTKRGL VIFVGATGTG KSTSLAAMIG YRNKNSTGHI ISIEDPIEYI HQHQGCIVTQ 
REVGLDTDSF EVALKNTLRQ APDVIMIGEV RSRETMDHAV AFAETGHLCL ATLHANNANQ 
ALERIIHFFP ADRHGQVWMD LSLNLKAIVA QQLVPTPDGK GRRAVIEVLL NTPLAADLIR 
KGEVHELKPL MKRSTEQGMQ TFDQALYQLY TQGEITYEDA LAHADSANDL RLMIKLGSES 
DADHLSSMTQ GLSLEITDDD PAGRRFR