| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0494 |
|---|
| Symbol | |
|---|
| ID | 5359255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 502079 |
|---|
| End bp | 502771 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640809548 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001345889 |
|---|
| Protein GI | 152986073 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
|---|
| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACGA TAGCAGAGAA TATTGCAAAG GTTGCCGCGC GCATCCGTGA GGCAGCGCAA
GCTGCGGGGC GCGATCCGGC CACGGTCGGG CTGCTCGCGG TGAGCAAGAC CAAGCCCGCC
GCCGCGGTGC GCGAGGCGCA CGCGGCCGGC CTCCGCGACT TCGGCGAGAA CTACCTGCAG
GAGGCCCTCG GCAAGCAGGC CGAACTGGCC GACTTGTCCT TGAACTGGCA CTTCATCGGC
CCCATCCAGT CGAACAAGAC CCGCCCCATC GCCGAGCATT TCCAGTGGGT GCACTCGGTG
GACCGGTTGA AGATCGCGCA GCGCCTGTCG GAGCAACGCC CGGCCGGCCT GCCGCCCCTG
AATATCTGCC TGCAGGTCAA CGTCAGCGGC GAAGCCAGCA AGTCCGGCTG CGCCCCAGAG
GACCTGCCGG CCCTGGCCGA GGCCGTGAAA CTCCTGCCCA ACCTCCGACT GCGTGGCCTG
ATGGCCATCC CCGAGCCCAC CGTCGAACGC GCCGCGCAAC ACGCCGCGTT CGCCCGCCTG
CGCGAGCTGC TGCTGGGTCT GAACCTTGGC CTGGACACCC TGTCCATGGG CATGAGCGAC
GACCTCGAGG CGGCCATCGC CGAAGGCGCG ACCTGGGTCC GCATCGGTAC CGCCCTGTTC
GGCGCGCGCG ACTACGGCGC GCCGACTTCT TGA
|
|---|
| Protein sequence | MSTIAENIAK VAARIREAAQ AAGRDPATVG LLAVSKTKPA AAVREAHAAG LRDFGENYLQ
EALGKQAELA DLSLNWHFIG PIQSNKTRPI AEHFQWVHSV DRLKIAQRLS EQRPAGLPPL
NICLQVNVSG EASKSGCAPE DLPALAEAVK LLPNLRLRGL MAIPEPTVER AAQHAAFARL
RELLLGLNLG LDTLSMGMSD DLEAAIAEGA TWVRIGTALF GARDYGAPTS
|
|---|
| |