| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0474 |
|---|
| Symbol | |
|---|
| ID | 5355199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 483442 |
|---|
| End bp | 484791 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640809528 |
|---|
| Product | 6-aminohexanoate-dimer hydrolase |
|---|
| Protein accession | YP_001345869 |
|---|
| Protein GI | 152988370 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAGGA TAAAAATAGC ACTCGGATTT ACTAGCCTAG AGAGAGGCTG CAGAGAATTT
AACTTAACCC AGGTGCTGGA AATCTCCACG CTACCAGCAA GCCTAGAAAA GAAAGGACTA
AATCGAATGA TAAAAAAATA TACAAATAAG AAAATTGTCA TTGTTCTTTC GGCGGCTCTA
GTAATTCTGA CGGCTACCTA CATTGGCAGC AAAGGCGTGA GGTTTTGGAA ACTGCATACT
TTGTTTAACT CGAATAAGAT TAACGAAAAC TTCCGATCCA TGCCGGACAT GTTCGAATCC
TTGCCAGTCA TAAAGGACAG CGAGACAAAC CAATTTCAGA CTGAATTAGC TAATATGCCT
GTGTCATTTA GCTTTCAAGG CAGACAAATT TTATTTGACG ACTGGATAAA GAGTAGCAAT
ACCACAGGTA TAATAGTATT CAGTAACGAC CGTATAGCCT ATGAGAGATA CTTTCAAGGG
AATAGCTCTC AAAGTCTTGC TATAGGATGG TCATTAAGCA AGTCCATAAT GTCACTTTTA
ATAGGAATGG CAGTTGATGA TGGATCAATT CATAGCTTGC TAGACCCTGT AAACCTCTAC
GCTCCACAGC TATCCACTAG CGGATACGCG GGTGTTTCTT TGAGAGATGT ACTCGAGATG
TCTTCAGGAA TAGCTTTCAA TGAAGACTAC GGAGATCCGG ACTCAGATAT TAACCAACTG
GGGAGGACCA TCGCACTTGG TGGATCAGTA AACGAAACAG TCAGCTCATT GAGAAGAGGA
GATGCACCAG GTAGAGTACA CCACTATGTT AGCGCGGATA CTCAGGTACT TGGCATGGTT
CTGCTAGGTT CGACTGGTAT GGGACCATCA AAGTTCATGA GTAAAAGACT GTGGTCTAAA
CTGGGGGCTG AGTGTAAAGG AGAATGGTTA ACTGATGATA AAGGGACAGA GCTGGCTTTC
GGCGGTGTAA ATCTTTGCCT AAGGGACTTT GCACGTATTG GTCTACTTTA TCTTCGGAAC
GGAAAAAGCT TGAACGGAAA TCAGATCGTA AGCTCCGCGT GGGTAACAGC ATCAACCAAG
CCTCGAAGTG ATCATTTGCG TCCTGGGCGT TTCAAAGAAA GCGGCGAGCC AAATCTTGGC
TATGGGTACC AATGGTGGAT TCCCGAAGGA ATGGAAGGGG AGTTCTTGGC TATCGGAGTA
TACGGGCAAT TCATATACGT CAATCCCAAA AGAGGCGTGG TCATTGCAAA GACCTCCGCC
TATAGCAACT ATAATGTTGA CGGAATAAGC ATGGAACATG AAGCCATTGC TGCATTTCGA
GCCATATCTA GGACTGTTGG AGTAAAGTGA
|
|---|
| Protein sequence | MKRIKIALGF TSLERGCREF NLTQVLEIST LPASLEKKGL NRMIKKYTNK KIVIVLSAAL
VILTATYIGS KGVRFWKLHT LFNSNKINEN FRSMPDMFES LPVIKDSETN QFQTELANMP
VSFSFQGRQI LFDDWIKSSN TTGIIVFSND RIAYERYFQG NSSQSLAIGW SLSKSIMSLL
IGMAVDDGSI HSLLDPVNLY APQLSTSGYA GVSLRDVLEM SSGIAFNEDY GDPDSDINQL
GRTIALGGSV NETVSSLRRG DAPGRVHHYV SADTQVLGMV LLGSTGMGPS KFMSKRLWSK
LGAECKGEWL TDDKGTELAF GGVNLCLRDF ARIGLLYLRN GKSLNGNQIV SSAWVTASTK
PRSDHLRPGR FKESGEPNLG YGYQWWIPEG MEGEFLAIGV YGQFIYVNPK RGVVIAKTSA
YSNYNVDGIS MEHEAIAAFR AISRTVGVK
|
|---|
| |