| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0471 |
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| Symbol | rpoH |
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| ID | 5357872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 480115 |
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| End bp | 480969 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640809525 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_001345866 |
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| Protein GI | 152989115 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.60439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACTT CTCTGCAACC TGTACATGCC TTGGTTCCAG GCGCAAACCT GGAAGCCTAC
GTGCATTCGG TGAACAGCAT CCCGCTGTTG TCGCCGGAAC AGGAGCGCGA ACTGGCCGAA
CGCCTCTTCT ATCAGCAAGA CCTGGAAGCG GCGCGGCAGA TGGTGTTGGC GCACCTGCGC
TTCGTTGTTC ATATCGCCAA GAGTTATTCG GGGTACGGCC TGGCCCAGGC CGACCTGATC
CAGGAAGGCA ACGTCGGCCT GATGAAGGCC GTGAAGCGTT TCAACCCGGA AATGGGCGTT
CGCCTGGTGT CCTTCGCCGT GCACTGGATC AAGGCGGAGA TCCACGAGTT CATCCTGCGC
AACTGGCGGA TCGTCAAGGT CGCCACCACC AAGGCGCAGC GCAAGCTGTT CTTCAACCTG
CGCAGCCAGA AGAAGCGCCT GGCCTGGTTG AACAACGAGG AAGTCCATCG CGTCGCCGAG
AGCCTGGGTG TCGAGCCCCG CGAAGTGCGC GAGATGGAAA GCCGCCTGAC CGGCCAGGAC
ATGGCGTTCG ACCCGGCCGC CGACGCGGAC GACGAGAGCG CCTACCAGTC GCCGGCGCAC
TACCTCGAAG ACCACCGCTA CGACCCGGCG CGCCAGTTGG AAGACGCCGA CTGGAGCGAC
AGCTCCAGCG CCAACCTGCA CGAGGCGCTG GAAGGCCTCG ACGAGCGCAG CCGCGACATT
CTCCAGCAGC GCTGGCTGTC CGAGGAGAAG GCCACGCTGC ATGACCTGGC GGAAAAGTAC
AACGTCTCCG CCGAGCGTAT CCGGCAACTG GAAAAGAACG CCATGAGCAA GCTGAAAGGG
CGGATTCTCG CCTGA
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| Protein sequence | MTTSLQPVHA LVPGANLEAY VHSVNSIPLL SPEQERELAE RLFYQQDLEA ARQMVLAHLR
FVVHIAKSYS GYGLAQADLI QEGNVGLMKA VKRFNPEMGV RLVSFAVHWI KAEIHEFILR
NWRIVKVATT KAQRKLFFNL RSQKKRLAWL NNEEVHRVAE SLGVEPREVR EMESRLTGQD
MAFDPAADAD DESAYQSPAH YLEDHRYDPA RQLEDADWSD SSSANLHEAL EGLDERSRDI
LQQRWLSEEK ATLHDLAEKY NVSAERIRQL EKNAMSKLKG RILA
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