| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0453 |
|---|
| Symbol | |
|---|
| ID | 5356527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 462190 |
|---|
| End bp | 463179 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640809507 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001345848 |
|---|
| Protein GI | 152985215 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAGTC AGTGGGTGTT CCTGTCCGTC CTTGCTCTTG CCGTACCCTC GTTCGCCTGG
GCGGAGGATG CGGTGTCCGA CCTCGCCAAG GAGCAGTCCA AGGCCGAGCA GGGCGACAAG
CGCGGCGATG AACTGTTCGC CGAATTCACC CGCCTCCGCC AGGCCGCCGA GACGGGCGAG
CCGCAGGCCC TGTTCGATTT CGGCGCCTAC TTCTACCAGC AGCAGAACTA CGTCAGCGCG
CGCGAATGGT GGGGCAAGGC TGCCGGCGCG GGGATGGCCC GCGCGCAGAT CCAGCTGGCC
ATGCTCTATC GCGATGGTGA CGGCGGTCGC GAGGACAAGA CCGAGGCGGC ACGCTGGTTC
CGGAAGGCCG CGGAGCAGGG GGATGCCGGC GCCCAGAATG AAATGGGCGT TCTCTACTGG
AGAGGCGAGG GGGTCGACCA GGACCGGGTC AAGGCCGGGA GCTGGTTCGA ACGCGCGGCG
GCCAGCGGTA GCGAAGACGC CGAAACCAAT CTGGGATGGT TCTACCTGGA CGACTTGCAG
AGCGATTCTG CCGTCCCTTC CTCCGACGAG GAAGCCGCCC TGCTGGACCG CTATGCCGCC
AGCCGGGAAA AGGCCTTCCA GTGGTTCTGC AAGGCAGCGA GCCAAGGGGA TGCCCGCGCC
CAGTTCAAGG TGGGCGAGGC CTACTGGAAC GGTTCCGGTG CCGGGATGAA CAAGCTGCAA
GCGCGGCTCT GGCTGGAAAA GGCCGCGCAG CAGCAGGATG CGGATGCCAT CGCCTGGCTG
GAGAGCGCCG ACCAGGCTGC CTGGTATACC CGCCTGGAAA ACTGGGTTCA CGCTGCGCTG
GATGGAGAGC TGTCCGGCAT CGCCGACTGC TCCGGTGTCG CCGATCGCCG GCACTCCGGC
CGTGGGGTGG AGAGTGCACC GTCCGAGCCG GAGGCGGTGG AAATCGGTGC GGAGGATGCG
ATACAGGCGG CCGAAGCGGC GAGCCAGTGA
|
|---|
| Protein sequence | MFSQWVFLSV LALAVPSFAW AEDAVSDLAK EQSKAEQGDK RGDELFAEFT RLRQAAETGE
PQALFDFGAY FYQQQNYVSA REWWGKAAGA GMARAQIQLA MLYRDGDGGR EDKTEAARWF
RKAAEQGDAG AQNEMGVLYW RGEGVDQDRV KAGSWFERAA ASGSEDAETN LGWFYLDDLQ
SDSAVPSSDE EAALLDRYAA SREKAFQWFC KAASQGDARA QFKVGEAYWN GSGAGMNKLQ
ARLWLEKAAQ QQDADAIAWL ESADQAAWYT RLENWVHAAL DGELSGIADC SGVADRRHSG
RGVESAPSEP EAVEIGAEDA IQAAEAASQ
|
|---|
| |