| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0426 |
|---|
| Symbol | |
|---|
| ID | 5353657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 435676 |
|---|
| End bp | 436875 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640809481 |
|---|
| Product | MFS family transporter |
|---|
| Protein accession | YP_001345822 |
|---|
| Protein GI | 152989143 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.291849 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCGTCG CCCTGGTCAC CGCGCTATGC CTGGCCGGCG ATTCGATGCT CTACATCGCC
CTGCCGATCT ACTGGCGCGA GGTTGGCCTG GAGGCGCTCT GGCAGGTCGG CGTGCTGCTG
TCGATCAACC GCCTGATCCG CCTGCCCTTC AATCCGCTGA TCGGCCGCTT GTACAAGCAT
CTGGCGCTGA AGACCGGGCT GCTCCTGGCG GTCGTCATCG GCGTGCTGAG CACCGCCGGC
TACGGCCTGG CCAGCGGGTT CCTGGCCTGG GTACTGCTGC GCGGGCTATG GGGGATCGGC
TGGTCGTTCT TCCGCATCGG CGGGCTCTCG GCGGTGGTCT ACTGCGCCGC CGACCACCAG
CGCGGCCGTG CCATGGGCCT GTACAACGGC CTCTACCGCC TGGGCAGCCT GGTCGGCATG
CTGCTCGGCG GGCTGCTGGT GCCGGTCCTC GGCCTGCCGG CGCTGGCGCT GTCCTTCGCG
ATCCTGGCGC TGCTCGGCCT GCCGCTGCTG GCGAAGGGTT TCGTCCTGCC GGAGAATCCC
GCCGGACATG CGCGGCCCCC CGCCGCAACG GCATCCACCA GCGTCGCCAG GCTCCCGCCG
CCGCGCGGCC TGGTGATCCT CAGCGGCTTC GGTACCGCGC TCCTGATCCA GGGCGTGCTC
GCCGCCACCC TGAGCGCGCT GATCGCCCGC AGCTTCGGCA CGGAGGTCAG CCTGCTCGGC
CTGGCGCTCA GCGCCGCCGG TCTCTCCGGG ATCATCCAGG CCCTGCGCTG GTCCTGGGAG
CCCTGGCTGG CCGGGCGCTT CGGTGCCTGG TCGGACGGCC CGCGCGGGCG CCAGGGCTAC
TACGTGGCCG CGCTGCTGGC CGGAGCGCTG GGCTTCGGCC TGCTCTCCAC CGCGCTGCCG
ATCCTCGCCT GGCTGGCCCT CGCGCTGCTG GTGATGCTGG TCGCCACCGC CCTCACCACC
CTGACCGACG CCCTGGCCGC CGACGTCGCC CGTGCCGGCG ACGTGGTCGG CTTCATGACC
CGCTACTCCA TCGTCCAGGA CCTCGGCGCC GCGCTCGGCC CGGCGCTGGC CTTCCTCCTA
CTGGAGCGGC CCGGCGGCTT CGCCTGGCTG TACTGGGGCG GCTCGCTGGC GTTCCTGCTG
CTGGCGCTGC TCTGGCTGCG TCGAACGAAT CCTCAGACCG GCTTGTTGAC CATCAGGTAG
|
|---|
| Protein sequence | MIVALVTALC LAGDSMLYIA LPIYWREVGL EALWQVGVLL SINRLIRLPF NPLIGRLYKH
LALKTGLLLA VVIGVLSTAG YGLASGFLAW VLLRGLWGIG WSFFRIGGLS AVVYCAADHQ
RGRAMGLYNG LYRLGSLVGM LLGGLLVPVL GLPALALSFA ILALLGLPLL AKGFVLPENP
AGHARPPAAT ASTSVARLPP PRGLVILSGF GTALLIQGVL AATLSALIAR SFGTEVSLLG
LALSAAGLSG IIQALRWSWE PWLAGRFGAW SDGPRGRQGY YVAALLAGAL GFGLLSTALP
ILAWLALALL VMLVATALTT LTDALAADVA RAGDVVGFMT RYSIVQDLGA ALGPALAFLL
LERPGGFAWL YWGGSLAFLL LALLWLRRTN PQTGLLTIR
|
|---|
| |