Gene PSPA7_0376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_0376 
Symbol 
ID5359476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp381137 
End bp383419 
Gene Length2283 bp 
Protein Length760 aa 
Translation table11 
GC content67% 
IMG OID640809430 
Producthypothetical protein 
Protein accessionYP_001345771 
Protein GI152986676 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.523743 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCCC GCCTGAGTGC CCTTCGCCTG AGCCTGGCCT ACCTGGCAGT CGCCATCGCC 
TGGGCCTTCC TGAGCGATCA TTTGTTACAA AACCAGGTAC AGGACCACGA CCAACTGGTC
TTCTGGATGA CCGCCAAGCG TCTGTTCTTC TTCGCCGCCA CCGGCCTGCT CCTGTACCTC
TACCTGGTAC GCCAGTTCCG CCGCAAGGCC CAGGCCTACG ATGAGTTGCA CGGCAGCGAA
CAGCGTCTGA ACCGGGCCCT GGAGGCAGTG CGCGACGGGC TCTGGGACTG GGACCTGGTG
ACCGGCAGGA TGTTCGTCTC GCCCGGCTAC GCGGCCCTGG TGGGGCTGAC GCCGGAGGAG
CTCGGCGACC CCATCGAGAC CTGGAAGAAG CGCCTGCACC CGGAGGAGTT CGCCACCGTG
CTGGAGGCCC ACCGCAACCA CTTGCAGGGC CTGACCGACA ACCTCGACCA CATCTACCGC
CTGCGTCACA AGGACGGCGA CTACCGCTGG ATCCACTCGC GCGGCCGGGT CCTGCGCGAC
GCCCTGGGCA AGCCGCTGCA CTACACCGGA GTGGCTCGCG ACATCACCTT GCAGCGGCTC
AAGGAAGACC ACCTGCGCCA GGCCGCGGCG GTGTTCGACA GCACCCGCGA AGGTGTGCTG
GTCACCGACG CCCAGGCGGT GATCGTCCAC GTCAATCCTT CCTTCGAGCG CATCACCGGC
TACCGCTCCG AGGACGTGCT CGGCAAGACC CCGGCGATCC TCCGTTCCGG CCGCCAAGAC
CAGGCGTTCT ACCAGCGCCT GTGGCTGGCC CTGCGTGAAC AGGACGTGTG GAGCGGGGAG
ATCTGGAACC GTCGCAAGAG CGGCGAGATC TACCCGCAGT GGCTGCACAT CCGCGCGGTG
CGCAACGATC AGGGCCAGCT GACCCACTAC GTCGGGGTGT TCTCCGACCT GAGCAGCATC
AAGCGCTCGG AGAACGAGTT GGACTTCCTC GCCCACCACG ACTCGCTGAC CGGGCTGCCC
AACCGCGTTT TGCTGCGCCA GCGCATCGAG CAGGCGCTGG AGGACGGCAA GGACCGGGCG
GTGGCCGGCG CCCTGCTGCT GATCGACCTC GACCATTTCA AGCACATCAA CGACAGCCTC
GGCCACACCA CCGGCGACAT GCTGCTCAAG GAAGTCAGCA AGCGCCTGCA GCACCAGCTC
GGCGAACGCT GCCTGCTGTC ACGCCTGGGC GGCGACGAGT TCGCCATTCT CGTCGAGAAC
GACGACCCGG AAGCCGTCGC GCGTCTCTCG CAGCGCATCC TCGACGGTTT CAACGCGCCG
TTCGACATCC ACTGCCAGCC GATCTATATC AGCGCCAGCC TCGGTGTCAG CCTCTACCCG
GAGGACGCCA GCGATGTCGA CCACTTGATG CAGCACGCCG ACGCCGCGCT GTTCCAGGCC
AAGGACAGCG GGCGCAACGC CTACGCCTTC TATACCCGCG TACTGACCGC CCGGGCTCGC
GCCCACGTCC AGGTGGAATC GGCGCTGCGC CACGCGCTGG ACCACGACGA GCTGCGCGTC
CACTACCAGC CGGTGCACGA CCTGGCCAGT GGGCGGATCG TCGGCGTCGA GTCGCTGGTG
CGCTGGCAGC ATCCCGAGCG CGGCCTGGTG CCGCCGGGCG AGTTCGTCCC GGTGGCGGAG
GAGTGCGGGC TGATCGCCGC GCTGGACAAC TGGGTGCTCA AGCGCGCCTG CCGGCAGATG
CGCGAGTGGC AGGACCGAGG CGTCGGACTG GAGTTCATCG CGGTCAACGT CTCCAGCCGG
CTATTCAACC GCGGCGGCCT GGAGGAGCGG ATCGCCAATG CCTTGGAGGA ATCCGGCCTG
GAACCACGCT ATCTGGAACT GGAAGTTACC GAGAGCGCGG TGATGGAGGA CTTCGAGCAG
TCCCTCAACC TGCTCTGCCG CCTGCGCATC CTCGGCGTGA ACCTGGCCAT CGACGACTTC
GGCACCGGCT ATTCCTCGCT GATGCGGCTC AAGCGCCTGC CGGTGCACAA GCTGAAGATC
GACCAGGGCT TCGTCGCCGG CCTGCCCGGC GCGGTGGATG ACGCGGCGAT CGCCCGCGCG
ATCATCGCCC TGGCCCAGAG CATGGGTCTG CGGGTGGTGG CCGAAGGCAT CGAGCACCAG
GACCAGGCAT TGTTCCTTCG CGAGCACGGC TGCGACTTCG GCCAGGGCTA CTGGTACGGG
CGCCCGCAAC CACCGGAAAC GCTGCGCTTC GACGCACCGC CGGTGGCGCT GCCGGAAGAC
TGA
 
Protein sequence
MNPRLSALRL SLAYLAVAIA WAFLSDHLLQ NQVQDHDQLV FWMTAKRLFF FAATGLLLYL 
YLVRQFRRKA QAYDELHGSE QRLNRALEAV RDGLWDWDLV TGRMFVSPGY AALVGLTPEE
LGDPIETWKK RLHPEEFATV LEAHRNHLQG LTDNLDHIYR LRHKDGDYRW IHSRGRVLRD
ALGKPLHYTG VARDITLQRL KEDHLRQAAA VFDSTREGVL VTDAQAVIVH VNPSFERITG
YRSEDVLGKT PAILRSGRQD QAFYQRLWLA LREQDVWSGE IWNRRKSGEI YPQWLHIRAV
RNDQGQLTHY VGVFSDLSSI KRSENELDFL AHHDSLTGLP NRVLLRQRIE QALEDGKDRA
VAGALLLIDL DHFKHINDSL GHTTGDMLLK EVSKRLQHQL GERCLLSRLG GDEFAILVEN
DDPEAVARLS QRILDGFNAP FDIHCQPIYI SASLGVSLYP EDASDVDHLM QHADAALFQA
KDSGRNAYAF YTRVLTARAR AHVQVESALR HALDHDELRV HYQPVHDLAS GRIVGVESLV
RWQHPERGLV PPGEFVPVAE ECGLIAALDN WVLKRACRQM REWQDRGVGL EFIAVNVSSR
LFNRGGLEER IANALEESGL EPRYLELEVT ESAVMEDFEQ SLNLLCRLRI LGVNLAIDDF
GTGYSSLMRL KRLPVHKLKI DQGFVAGLPG AVDDAAIARA IIALAQSMGL RVVAEGIEHQ
DQALFLREHG CDFGQGYWYG RPQPPETLRF DAPPVALPED