Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0376 |
Symbol | |
ID | 5359476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 381137 |
End bp | 383419 |
Gene Length | 2283 bp |
Protein Length | 760 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640809430 |
Product | hypothetical protein |
Protein accession | YP_001345771 |
Protein GI | 152986676 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.523743 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCCCC GCCTGAGTGC CCTTCGCCTG AGCCTGGCCT ACCTGGCAGT CGCCATCGCC TGGGCCTTCC TGAGCGATCA TTTGTTACAA AACCAGGTAC AGGACCACGA CCAACTGGTC TTCTGGATGA CCGCCAAGCG TCTGTTCTTC TTCGCCGCCA CCGGCCTGCT CCTGTACCTC TACCTGGTAC GCCAGTTCCG CCGCAAGGCC CAGGCCTACG ATGAGTTGCA CGGCAGCGAA CAGCGTCTGA ACCGGGCCCT GGAGGCAGTG CGCGACGGGC TCTGGGACTG GGACCTGGTG ACCGGCAGGA TGTTCGTCTC GCCCGGCTAC GCGGCCCTGG TGGGGCTGAC GCCGGAGGAG CTCGGCGACC CCATCGAGAC CTGGAAGAAG CGCCTGCACC CGGAGGAGTT CGCCACCGTG CTGGAGGCCC ACCGCAACCA CTTGCAGGGC CTGACCGACA ACCTCGACCA CATCTACCGC CTGCGTCACA AGGACGGCGA CTACCGCTGG ATCCACTCGC GCGGCCGGGT CCTGCGCGAC GCCCTGGGCA AGCCGCTGCA CTACACCGGA GTGGCTCGCG ACATCACCTT GCAGCGGCTC AAGGAAGACC ACCTGCGCCA GGCCGCGGCG GTGTTCGACA GCACCCGCGA AGGTGTGCTG GTCACCGACG CCCAGGCGGT GATCGTCCAC GTCAATCCTT CCTTCGAGCG CATCACCGGC TACCGCTCCG AGGACGTGCT CGGCAAGACC CCGGCGATCC TCCGTTCCGG CCGCCAAGAC CAGGCGTTCT ACCAGCGCCT GTGGCTGGCC CTGCGTGAAC AGGACGTGTG GAGCGGGGAG ATCTGGAACC GTCGCAAGAG CGGCGAGATC TACCCGCAGT GGCTGCACAT CCGCGCGGTG CGCAACGATC AGGGCCAGCT GACCCACTAC GTCGGGGTGT TCTCCGACCT GAGCAGCATC AAGCGCTCGG AGAACGAGTT GGACTTCCTC GCCCACCACG ACTCGCTGAC CGGGCTGCCC AACCGCGTTT TGCTGCGCCA GCGCATCGAG CAGGCGCTGG AGGACGGCAA GGACCGGGCG GTGGCCGGCG CCCTGCTGCT GATCGACCTC GACCATTTCA AGCACATCAA CGACAGCCTC GGCCACACCA CCGGCGACAT GCTGCTCAAG GAAGTCAGCA AGCGCCTGCA GCACCAGCTC GGCGAACGCT GCCTGCTGTC ACGCCTGGGC GGCGACGAGT TCGCCATTCT CGTCGAGAAC GACGACCCGG AAGCCGTCGC GCGTCTCTCG CAGCGCATCC TCGACGGTTT CAACGCGCCG TTCGACATCC ACTGCCAGCC GATCTATATC AGCGCCAGCC TCGGTGTCAG CCTCTACCCG GAGGACGCCA GCGATGTCGA CCACTTGATG CAGCACGCCG ACGCCGCGCT GTTCCAGGCC AAGGACAGCG GGCGCAACGC CTACGCCTTC TATACCCGCG TACTGACCGC CCGGGCTCGC GCCCACGTCC AGGTGGAATC GGCGCTGCGC CACGCGCTGG ACCACGACGA GCTGCGCGTC CACTACCAGC CGGTGCACGA CCTGGCCAGT GGGCGGATCG TCGGCGTCGA GTCGCTGGTG CGCTGGCAGC ATCCCGAGCG CGGCCTGGTG CCGCCGGGCG AGTTCGTCCC GGTGGCGGAG GAGTGCGGGC TGATCGCCGC GCTGGACAAC TGGGTGCTCA AGCGCGCCTG CCGGCAGATG CGCGAGTGGC AGGACCGAGG CGTCGGACTG GAGTTCATCG CGGTCAACGT CTCCAGCCGG CTATTCAACC GCGGCGGCCT GGAGGAGCGG ATCGCCAATG CCTTGGAGGA ATCCGGCCTG GAACCACGCT ATCTGGAACT GGAAGTTACC GAGAGCGCGG TGATGGAGGA CTTCGAGCAG TCCCTCAACC TGCTCTGCCG CCTGCGCATC CTCGGCGTGA ACCTGGCCAT CGACGACTTC GGCACCGGCT ATTCCTCGCT GATGCGGCTC AAGCGCCTGC CGGTGCACAA GCTGAAGATC GACCAGGGCT TCGTCGCCGG CCTGCCCGGC GCGGTGGATG ACGCGGCGAT CGCCCGCGCG ATCATCGCCC TGGCCCAGAG CATGGGTCTG CGGGTGGTGG CCGAAGGCAT CGAGCACCAG GACCAGGCAT TGTTCCTTCG CGAGCACGGC TGCGACTTCG GCCAGGGCTA CTGGTACGGG CGCCCGCAAC CACCGGAAAC GCTGCGCTTC GACGCACCGC CGGTGGCGCT GCCGGAAGAC TGA
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Protein sequence | MNPRLSALRL SLAYLAVAIA WAFLSDHLLQ NQVQDHDQLV FWMTAKRLFF FAATGLLLYL YLVRQFRRKA QAYDELHGSE QRLNRALEAV RDGLWDWDLV TGRMFVSPGY AALVGLTPEE LGDPIETWKK RLHPEEFATV LEAHRNHLQG LTDNLDHIYR LRHKDGDYRW IHSRGRVLRD ALGKPLHYTG VARDITLQRL KEDHLRQAAA VFDSTREGVL VTDAQAVIVH VNPSFERITG YRSEDVLGKT PAILRSGRQD QAFYQRLWLA LREQDVWSGE IWNRRKSGEI YPQWLHIRAV RNDQGQLTHY VGVFSDLSSI KRSENELDFL AHHDSLTGLP NRVLLRQRIE QALEDGKDRA VAGALLLIDL DHFKHINDSL GHTTGDMLLK EVSKRLQHQL GERCLLSRLG GDEFAILVEN DDPEAVARLS QRILDGFNAP FDIHCQPIYI SASLGVSLYP EDASDVDHLM QHADAALFQA KDSGRNAYAF YTRVLTARAR AHVQVESALR HALDHDELRV HYQPVHDLAS GRIVGVESLV RWQHPERGLV PPGEFVPVAE ECGLIAALDN WVLKRACRQM REWQDRGVGL EFIAVNVSSR LFNRGGLEER IANALEESGL EPRYLELEVT ESAVMEDFEQ SLNLLCRLRI LGVNLAIDDF GTGYSSLMRL KRLPVHKLKI DQGFVAGLPG AVDDAAIARA IIALAQSMGL RVVAEGIEHQ DQALFLREHG CDFGQGYWYG RPQPPETLRF DAPPVALPED
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