Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0324 |
Symbol | |
ID | 5359061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 335600 |
End bp | 336850 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640809378 |
Product | putative porin |
Protein accession | YP_001345720 |
Protein GI | 152987751 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.414425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCACC CGAGCCTCGT CCGCGCGCTC TGCGCGTCCC TCTGCCTCGG CGCCGGCCTG CCGGTCCACG CCGAGCGAGG TTTCCTCGAA GACGCCAAGG TCAGCCTCAC CGCGCGCAAC TTCTACCTGA ACCGCGACTT CGTCGGCCAC GCCAGCCAGG ACAAGGCCGA GGAATGGACG CAGAGCTTCA TCCTCGACGC CCGCTCCGGC TTCACCGAGG GCAGCGTCGG CTTCGGCCTC GATGTCCTCG GCCTGTACAG CCTGAAGCTG GATGGCGGCA AGGGAACGGC CGGCACCCAG TTGCTGCCGA CCCACGGCGA CGGCCGCCCG GCCGACGACT TCGGACGCCT GGCGGTGGCC GGCAGGCTGC GCGTGTCGAA TACCGAACTG AAGCTCGGCG AATGGATGCC GGTGCTGCCG ATCCTCCGTT CCGACGATGG CCGCTCGCTG CCGCAGACCT TCCGCGGCGG CCAGCTCAGC GCCAGCGAGA TCGCCGGCCT GACCCTCCAC GCCGGCCAAT TGCGCGGCAA CAGCCCGCGC AACGACGCAA GCATGCAGGA CATGTCGCTG TTCGGCCGGC CGGCCGCCAC TTCCGACCGT TTCGATTTCG TCGGTGGCGA ATATCGCTTC AACGGTGAAC GCACCCTGCT CGGCCTGTGG CACGCCGAGC TGAAGGACAT CTACCGCCAG CAGTACCTGC AACTGCAACA CAGCCAGCCA CTCGGCGGCT GGCTGCTGGG CGCCAACCTC GGCTGGTTCC GTGGCCGCGA CGATGGCAGC GCGCGCGCCG GCGAACTCGA CAACCGCACC GTTTCCGCGC TGTTCTCCGT GCGCCACGGC CTGCATGCCC TCTACCTCGG CCTGCAGAAG GTCGGCGGCG ACGACGGCTG GATGCGGGTC AACGGCACCA GCGGCGGCAC CCTGGCCAAC GACAGCTACA ACGCCAGCTA CGACAACCCC GGCGAACGTT CCTGGCAGTT GCGCTACGAC TTCGACTTCG TCGGCCTCGG CCTGCCCGGC CTGACCTTCA TGACCCGCTA CCTGCATGGC AGCCATGTGC GTCTGGCCGG AGTCACCGAC GATGGTAGCG AATGGGGACG CGAGAGCGAG CTGGGCTACA CGGTGCAGGG CGGCGCCTTC AAGCGCCTCA ACCTGCGCTG GCGCAATTCC AGCCAGCGCC GCGACTGGGG CAGCAATACC CGTTTCGACG AGAACCGGCT GATCGTCAGC TATCCGCTGG GCCTGTTCTG A
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Protein sequence | MSHPSLVRAL CASLCLGAGL PVHAERGFLE DAKVSLTARN FYLNRDFVGH ASQDKAEEWT QSFILDARSG FTEGSVGFGL DVLGLYSLKL DGGKGTAGTQ LLPTHGDGRP ADDFGRLAVA GRLRVSNTEL KLGEWMPVLP ILRSDDGRSL PQTFRGGQLS ASEIAGLTLH AGQLRGNSPR NDASMQDMSL FGRPAATSDR FDFVGGEYRF NGERTLLGLW HAELKDIYRQ QYLQLQHSQP LGGWLLGANL GWFRGRDDGS ARAGELDNRT VSALFSVRHG LHALYLGLQK VGGDDGWMRV NGTSGGTLAN DSYNASYDNP GERSWQLRYD FDFVGLGLPG LTFMTRYLHG SHVRLAGVTD DGSEWGRESE LGYTVQGGAF KRLNLRWRNS SQRRDWGSNT RFDENRLIVS YPLGLF
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