Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0318 |
Symbol | pcaC |
ID | 5357016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 330433 |
End bp | 330834 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640809372 |
Product | gamma-carboxymuconolactone decarboxylase |
Protein accession | YP_001345714 |
Protein GI | 152986013 |
COG category | [S] Function unknown |
COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
TIGRFAM ID | [TIGR02425] 4-carboxymuconolactone decarboxylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.623335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACGAGA AACAACGCTA CGAAGCCGGC ATGCAAGTGC GCCGCGCGGT GCTCGGCGAC GCCCATGTCG ACCGCAGCCT GGCCAGCCTG ACGCCGTTCA ACGAAGAGTT CCAGGAGATG ATCACCCGCC ACGCCTGGGG CGACATCTGG ACCCGCCCGG GGCTGCCGCG GCACACCCGT AGCCTGGTGA CCATCGCCAT GCTGATCGGC ATGAACCGCA ACGAGGAACT CAAGCTGCAC CTGCGCGCGG CGAAGAACAA CGGCGTGAGT CGCGACGAGA TCAAGGAAGT GATCATGCAG AGCGCCATCT ACTGCGGCAT TCCGGCGGCC AACGCGACCT TCCACCTGGC CGAGTCGGTG TGGGACGAAC TGGGCGTGGA ATCGCAGCAG GAGACCCGCT AG
|
Protein sequence | MDEKQRYEAG MQVRRAVLGD AHVDRSLASL TPFNEEFQEM ITRHAWGDIW TRPGLPRHTR SLVTIAMLIG MNRNEELKLH LRAAKNNGVS RDEIKEVIMQ SAIYCGIPAA NATFHLAESV WDELGVESQQ ETR
|
| |