Gene PSPA7_0314 details

Gene Information

• Locus tag: PSPA7_0314
• Symbol: pcaF
• ID: 5358343
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 325555
• End bp: 326760
• Gene Length: 1206 bp
• Protein Length: 401 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 640809368
• Product: beta-ketoadipyl CoA thiolase
• Protein accession: YP_001345710
• Protein GI: 152986310
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0183] Acetyl-CoA acetyltransferase
• TIGRFAM ID: [TIGR01930] acetyl-CoA acetyltransferases; [TIGR02430] beta-ketoadipyl CoA thiolase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCGCG AGGTATTCAT CTGCGATGCC GTGCGCACGC CTATCGGTCG CTTCGGCGGC 
AGTCTCGCCG CGGTGCGCGC CGACGACCTC GCGGCGGTGC CGCTGAAGGC CCTGGTCGAG 
CGCAACCCGG GTGTCGACTG GTCGGCGCTG GACGAGGTGT TCCTCGGCTG CGCCAACCAG 
GCCGGCGAGG ACAACCGCAA CGTGGCGCGC ATGGCGCTGT TGCTGGCCGG GCTGCCGGAA 
AGCGTGCCCG GGGTCACTCT CAACCGCCTC TGCGCTTCGG GAATGGACGC CATCGGCACG 
GCGTTCCGCG CCATCGCCAG CGGCGAGATG GAGCTGGCCA TCGCCGGCGG CGTCGAGTCG 
ATGTCGCGCG CGCCCTACGT GATGGGCAAG GCCGATAGCG CCTTCGGCCG CGGGCAGAAG 
ATCGAGGACA CCACCATCGG CTGGCGCTTC GTCAACCCGC TGATGAAGGA GCAGTACGGC 
ATCGACCCGA TGCCGCAGAC CGCCGACAAC GTCGCCGACG ACTACCGCGT GTCGCGCGCC 
GACCAGGACG CCTTCGCCCT GCGCAGCCAG CAGCGCGCCG GGCGGGCCCA GGCGGCCGGC 
TTCTTCGCCG AGGAAATCGT CCCGGTGACG ATTCGCGGAC GCAAGGGCGA TACCCTGGTC 
GAGCACGACG AGCACCCGCG TCCGGACACC AGCCTGGAGG CGTTGGCCCG GCTCAAACCG 
GTCAACGGGC CGGAGAAGAC CGTCACTGCC GGCAACGCGT CCGGGGTCAA CGATGGCGCC 
GCCGCGCTGA TCCTGGCCTC CGCCGAAGCG GTGGAGAGGC ATCGCCTGAC TCCGCGCGCG 
CGGGTGCTGG GCATGGCCAG CGCCGGCGTG GCCCCACGGA TCATGGGCAT CGGCCCGGTG 
CCGGCGGTGC GCAAGCTGTT GCGGCGCCTG GACCTGGCGA TCGACGCCTT CGACGTGATC 
GAACTCAACG AAGCCTTCGC CAGCCAGGGC CTGGCCTGCC TGCGCGAACT GGGCGTGGCC 
GACGACAGCG AGAAGGTCAA CCCGAACGGC GGCGCCATCG CCCTCGGTCA CCCGCTGGGG 
ATGAGCGGCG CGCGGCTGGT CCTCACCGCG CTCCACCAAC TGGAGAAGAG CGGCGGGCGG 
CGCGGCCTGG CGACCATGTG CGTGGGCGTC GGCCAGGGCC TGGCGCTGGC CATCGAGCGG 
GTCTGA 

 

Protein sequence

MSREVFICDA VRTPIGRFGG SLAAVRADDL AAVPLKALVE RNPGVDWSAL DEVFLGCANQ 
AGEDNRNVAR MALLLAGLPE SVPGVTLNRL CASGMDAIGT AFRAIASGEM ELAIAGGVES 
MSRAPYVMGK ADSAFGRGQK IEDTTIGWRF VNPLMKEQYG IDPMPQTADN VADDYRVSRA 
DQDAFALRSQ QRAGRAQAAG FFAEEIVPVT IRGRKGDTLV EHDEHPRPDT SLEALARLKP 
VNGPEKTVTA GNASGVNDGA AALILASAEA VERHRLTPRA RVLGMASAGV APRIMGIGPV 
PAVRKLLRRL DLAIDAFDVI ELNEAFASQG LACLRELGVA DDSEKVNPNG GAIALGHPLG 
MSGARLVLTA LHQLEKSGGR RGLATMCVGV GQGLALAIER V