Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0281 |
Symbol | exbD1 |
ID | 5356695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 296815 |
End bp | 297216 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640809335 |
Product | transport protein ExbD |
Protein accession | YP_001345677 |
Protein GI | 152984058 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCTTCT CGACCCAGGA CAGCGACGAA GTCCTTTCCG AAATCAACGT CACCCCGCTG GTCGATGTGA TGCTGGTGCT GCTGGTGGTG TTCATCGTCA CCGCGCCGCT GCTGACCAAC TCGATCCCGA TCAACCTGCC GAAGACCGAA TCGGTGGCCC CGCCGGAGCA GAAGGATCCC CTGGTGGTGA GCATCGATGG CGCCGGCAAG CTGTTCGTCA ACAAGGACGA GATCCAGCCG GAGCTGCTGG AGAGCAACCT GGCCGCGGCC AAGGCGAAGG ACGCCGAGGT CCGCGTGCAG TTGCAGGCCG ACGAAGGGGT GAACTACGGC CAGGTGGCGA AGGCCATGGC TTCCATCGAG CGCGCCGGGA TCACCAGGCT GGCGGTGATC ACCGCACGCT GA
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Protein sequence | MAFSTQDSDE VLSEINVTPL VDVMLVLLVV FIVTAPLLTN SIPINLPKTE SVAPPEQKDP LVVSIDGAGK LFVNKDEIQP ELLESNLAAA KAKDAEVRVQ LQADEGVNYG QVAKAMASIE RAGITRLAVI TAR
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