Gene PSPA7_0216 details

Gene Information

• Locus tag: PSPA7_0216
• Symbol: ahpC
• ID: 5358994
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 228400
• End bp: 228963
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 640809270
• Product: alkyl hydroperoxide reductase subunit C
• Protein accession: YP_001345612
• Protein GI: 152986830
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0450] Peroxiredoxin
• TIGRFAM ID: [TIGR03137] peroxiredoxin

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.47583
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCTGA TCAACACTCA AGTCCAACCG TTCAAGGTCA ACGCTTTCCA CAACGGCAAG 
TTCATCGAGG TGACCGAGGA ATCCCTGAAG GGCAAGTGGT CGGTCCTGAT CTTCATGCCG 
GCTGCCTTCA CCTTCAACTG CCCGACCGAG ATCGAAGACG CCGCCAACAA CTACGGCGAG 
TTCCAGAAGG CCGGTGCCGA GGTCTACATC GTGACCACCG ACACCCACTT CTCGCACAAG 
GTCTGGCACG AAACCTCGCC GGCCGTCGGC AAGGCCCAGT TCCCGCTGAT CGGCGACCCG 
ACCCACCAGC TGACCAATGC CTTCGGCGTG CACATCCCGG AAGAAGGCCT GGCTCTGCGC 
GGTACCTTCG TGATCAACCC GGAAGGCGTG ATCAAGACCG TCGAGATCCA CTCCAACGAG 
ATCGCCCGTG ACGTCGGCGA GACCGTGCGC AAGCTGAAGG CCGCCCAGTA CACCGCTGCC 
CACCCGGGCG AAGTCTGCCC GGCCAAGTGG AAGGAAGGCG AGAAGACCCT CGCGCCGTCC 
CTGGACCTGG TCGGCAAGAT CTAA 

 

Protein sequence

MSLINTQVQP FKVNAFHNGK FIEVTEESLK GKWSVLIFMP AAFTFNCPTE IEDAANNYGE 
FQKAGAEVYI VTTDTHFSHK VWHETSPAVG KAQFPLIGDP THQLTNAFGV HIPEEGLALR 
GTFVINPEGV IKTVEIHSNE IARDVGETVR KLKAAQYTAA HPGEVCPAKW KEGEKTLAPS 
LDLVGKI