Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0214 |
Symbol | |
ID | 5355532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 226187 |
End bp | 227284 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640809268 |
Product | ABC transporter permease |
Protein accession | YP_001345610 |
Protein GI | 152986122 |
COG category | [R] General function prediction only |
COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.160863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGTTGT CCCTGGAACC GCGTGGCCGG CAGTCGCGCT GGATACTACT GGCCTCTCCG CTGCTGGCGG GGCTGCTGAC CCTGGTCTGC GGCGCGCTGC TGTTCGCCGG TCTCGGTCAC GATCCGTGGC AGGCCCTGCA TACCGTGCTG GTACAGCCGG TCAGCGATCT CTACGGGATC GGCGAGCTGC TGGTGAAAGC CATGCCGATC CTGCTTTGTG CCCTCGGCCT GGCGCTGGCC TACCAGGCGC GCGTGTGGAA CATCGGCGCG GAGGGCCAAC TGCTGATCGG CGCCCTGGCC GGCAGCGCGG TGGCGATCCA GTTGCTCGAC TGGCAGAGCC GCTGGGCGCT GGCCGGGGTG CTGCTCGCCG GGAGCGCTGC CGGGGCGTTC TGGGCCGGGC TCGCCGCCTG GCTGCGGACG CGCTTCAACG CCAATGAGAT CCTCACCACC ATCATGCTCA ACTACATCGC GCTGAACCTG CTGCTGTACG GCGTGCACGG GCCGTTGAAG GACCCGGAGG GCTTCAACTT CCCGCAGTCG GCGCTGTTCG GCGAAGCCAG CCGCCTGCCG GCGCTGTTCG AGGACAGCCG GGTGCACTTC GGCGCGCTGT TCGGCCTGCT GGCGCTGGCG GCGGTCTGGG TGCTGGCGCA GCGCAGCTTC CTCGGTTTCC AGGTCCGCGT ACTCGGCCTG GATCGCCGCG CCGCCGGTTT CGCCGGTTTC CGCGAGAAGC GCCTGGTCTG GTTCGTCCTG CTGTTTTCCG GGGCGCTGGC GGGGCTGGCG GGCGTCTGCG AGGTCGCTGG CCCGATCGGC CAGCTGGTGC CGCAGGTCTC GCCGGGCTAT GGCTACGCGG CGATCACCGT GGCCTTCCTC GGCCGCCTGA ACCCCTTCGG CATCCTCGCC GCCAGCCTGC TGATGGCATT GCTCTACCTG GGGGGCGAGG CCGCGCAGAT GAGCCTCAAC CTGCCGCTGG CGCTGACCGG GCTGTTCCAG GGAATGATGC TGTTCTTCCT CCTCGCCTGC GACGTGCTGA TCCTCTACCG CCCGCGCCTG CACGGGCACT GGCGCAAGCG CCCGGCACTG CGCGACGCCC TGGCCTGA
|
Protein sequence | MLLSLEPRGR QSRWILLASP LLAGLLTLVC GALLFAGLGH DPWQALHTVL VQPVSDLYGI GELLVKAMPI LLCALGLALA YQARVWNIGA EGQLLIGALA GSAVAIQLLD WQSRWALAGV LLAGSAAGAF WAGLAAWLRT RFNANEILTT IMLNYIALNL LLYGVHGPLK DPEGFNFPQS ALFGEASRLP ALFEDSRVHF GALFGLLALA AVWVLAQRSF LGFQVRVLGL DRRAAGFAGF REKRLVWFVL LFSGALAGLA GVCEVAGPIG QLVPQVSPGY GYAAITVAFL GRLNPFGILA ASLLMALLYL GGEAAQMSLN LPLALTGLFQ GMMLFFLLAC DVLILYRPRL HGHWRKRPAL RDALA
|
| |