| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0181 |
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| Symbol | ctaD |
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| ID | 5356983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 198555 |
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| End bp | 200147 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640809235 |
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| Product | cytochrome c oxidase subunit I |
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| Protein accession | YP_001345577 |
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| Protein GI | 152983842 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCTG TGATCGATAC GCCCGACCAC CATGCCGGCG ACCACCACCA CGGGCCGGCC
AAGGGCCTGA TGCGCTGGGT GCTGACCACC AACCACAAGG ACATCGGCAC CCTCTACCTG
TGGTTCAGCT TCATGATGTT CCTGCTCGGC GGCTCGATGG CCATGGTGAT CCGCGCCGAG
CTGTTCCAGC CCGGGCTGCA GATCGTCGAG CCGGCGTTCT TCAACCAGAT GACCACCATG
CACGGCCTGA TCATGGTCTT CGGCGCGGTG ATGCCGGCCT TCGTCGGCCT GGCCAACTGG
ATGATCCCGC TGATGATCGG CGCGCCGGAC ATGGCCCTGC CACGGATGAA CAACTTCAGC
TTCTGGCTGC TCCCGGCGGC CTTCGGCCTG CTGGTCAGCA CCCTGTTCAT GCCCGGCGGC
GGCCCCAACT TCGGCTGGAC CTTCTACGCG CCGCTGTCGA CCACCTTCGC CCCGCACAGC
GTGACCTTCT TCATCTTCGC CATCCACCTG GCCGGGATCA GCTCGATCAT GGGCGCGATC
AACGTGATCG CCACCATCCT CAACCTGCGT GCGCCGGGCA TGACCCTGAT GAAGATGCCG
CTGTTCGTCT GGACCTGGCT GATCACCGCG TTCCTGCTGA TCGCGGTGAT GCCGGTGCTG
GCCGGGGTGG TGACCATGAT GCTGATGGAC ATCCATTTCG GCACCAGCTT CTTCAGCGCC
GCCGGCGGCG GCGACCCGGT GCTGTTCCAG CACGTGTTCT GGTTCTTCGG CCACCCCGAG
GTGTACATCA TGATCCTGCC CGCCTTCGGC GCGGTCAGCG CGATCATCCC GACCTTCGCG
CGCAAGCCGC TGTTCGGCTA CACCTCGATG GTCTACGCCA CCGCCAGCAT CGCCTTCCTC
TCCTTCGTGG TCTGGGCGCA CCACATGTTC GTGGTCGGCA TCCCGGTCAC CGGCGAGCTG
TTCTTCATGT ACGCCACCAT GCTGATCGCC GTGCCCACCG GGGTGAAGGT GTTCAACTGG
GTGACCACCA TGTGGGAGGG CTCGCTGACC TTCGAGACGC CGATGCTGTT CGCCGTGGCC
TTCGTCATCC TGTTCACCAT CGGCGGCTTC TCCGGCCTGA TGCTGGCGAT CGCCCCGGCG
GACTTCCAGT ACCACGACAC CTACTTCGTG GTCGCCCACT TCCACTACGT GCTGGTGCCC
GGCGCGATCT TCGGCATCTT CGCCTCGGCC TACTACTGGC TGCCGAAGTG GACCGGCCAC
ATGTACGACG AGACCCTCGG CAAGCTGCAC TTCTGGATGA GCTTCGTCGG CATGAACCTG
GCGTTCTTCC CGATGCACTT CGTCGGCCTC GCCGGCATGC CGCGACGGAT CCCGGACTAC
AACCTGCAGT TCGCCGACTT CAACATGGTC TCGTCGATCG GCGCCTTCAT GTTCGGCACC
ACCCAGCTGC TGTTCCTGTT CATCGTCATC AAGTGCATCC GCAGCGGCAA GCCGGCCCCG
GCCAAGCCCT GGGATGGCGC CGAGGGCCTG GAGTGGAGCA TTCCCTCGCC GGCGCCCTAC
CACACCTTCA GCACCCCGCC CGAGGTCAAG TGA
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| Protein sequence | MSAVIDTPDH HAGDHHHGPA KGLMRWVLTT NHKDIGTLYL WFSFMMFLLG GSMAMVIRAE
LFQPGLQIVE PAFFNQMTTM HGLIMVFGAV MPAFVGLANW MIPLMIGAPD MALPRMNNFS
FWLLPAAFGL LVSTLFMPGG GPNFGWTFYA PLSTTFAPHS VTFFIFAIHL AGISSIMGAI
NVIATILNLR APGMTLMKMP LFVWTWLITA FLLIAVMPVL AGVVTMMLMD IHFGTSFFSA
AGGGDPVLFQ HVFWFFGHPE VYIMILPAFG AVSAIIPTFA RKPLFGYTSM VYATASIAFL
SFVVWAHHMF VVGIPVTGEL FFMYATMLIA VPTGVKVFNW VTTMWEGSLT FETPMLFAVA
FVILFTIGGF SGLMLAIAPA DFQYHDTYFV VAHFHYVLVP GAIFGIFASA YYWLPKWTGH
MYDETLGKLH FWMSFVGMNL AFFPMHFVGL AGMPRRIPDY NLQFADFNMV SSIGAFMFGT
TQLLFLFIVI KCIRSGKPAP AKPWDGAEGL EWSIPSPAPY HTFSTPPEVK
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