Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0149 |
Symbol | |
ID | 5355309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 164697 |
End bp | 166046 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640809203 |
Product | hypothetical protein |
Protein accession | YP_001345545 |
Protein GI | 152985769 |
COG category | [M] Cell wall/membrane/envelope biogenesis [S] Function unknown |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins [COG3455] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family [TIGR03350] type VI secretion system OmpA/MotB family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0371837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCCCA TCGACGATCC CTTCGGCACC CCGGCCGGCG GTGGCAACGG AAGCCCGCCC GACGACCGCA CCATGATCAT GCCGCGCCCC GGCGGTCGCG CGCCGGAACC GGCCAGCGGC CCCCGCGCCG GCGACCCCTA CACGCCGCCG CCGATGGCCA GCCTGGCACC GCTGGCCAGC CGGGGCGACG GCCTCAACCC GCTGGAGCAG GCCGCCGGCC CGCTGCTGGC GATGCTCACC CGCCTGCGCA GCACCATCGC CCACCCGGCG CCGGCCAGCC TGCGCGCACA GCTGCTCGGC TACCTGCGCC AGTTCGAGGA GAAGGCGCGC CAGGCCGGGG TCGCCGCGGA CGAAGTGATG CTGGCGCGCT ACGTGCTCTG CACCGCCCTC GACGAAGCGG TGCTCAGCAC GCCCTGGGGC AGCGCCAGCG ACTGGGGCAA GCAGAGCCTG TTGATCACCC TGCACAACGA GGCCTGGGGC GGCGAGAAGG TCTTCCAGCT GCTCGAGCAC TGCCTGCAGA ACCCGCACCA GCGCCTGCAT CTGCTGGAGC TGCTGTACCT GTGCACCAGC CTCGGCTTCG AAGGCCGCTA CCGGGTCATG CACGACGGCC GCAGCCAGCT GGAGACACTG CGCGAGCGCA CCGCGGCGGT GATCCGCAGC ACCCGCGGCG AATACGAGCG CGAGCTGTCG CCGCACTGGC GCGGCCTCAG CGTGATGCGC GACCGCCTTT CGCAATACCT GCCGCCGTGG GTCGGCATCG CCATCGGCCT GGCCCTGCTG CTGGCCCTGC TGTTCGGCCT GCGGATGAAG CTGGCCGCCG ACGCCGAGCC GGTGTTCAGG CGCATCCACG CCATCGGCGA GATCCCGGTA CAGGCCATCG ACCGCCCGGC GATCCAGCCG CGGGTGATCG AGCGGCCGCG CCTGGCGCGC TTCCTCGCCG AGGACATCAA GGCCCAGCGG GTGGCGGTGG AAGACGCCGT CGATCGCTCG GTGGTGACCA TCCGCGGCGA CGAGCTGTTC GCCAGCGCCA GCGCCAGCGT GCGCGACGAG TTCCAGCCGC TGCTGCTGCG CATCGCCGAC GCCCTGCGCA AGGTCAAGGG CCAGGTGCTG GTCACCGGCC ATAGCGACAA CCGGCCGATC GCCACGCTGC GCTACCCGTC CAACTGGAAA CTGTCCCAGG CCCGCGCCCA GGAGGTCGCC GACCTGCTCG GCGCGACCAC CGGCGAAGCC GGCCGCTTCA CCGCCGAAGG GCGCAGCGAC ACCGAGCCGG TGGCGACCAA TGCCAGCGCC GAAGGCCGCG CACGCAACCG CCGGGTGGAA ATCACCGTAT TCGCGGAGGG TGCGCAATGA
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Protein sequence | MSPIDDPFGT PAGGGNGSPP DDRTMIMPRP GGRAPEPASG PRAGDPYTPP PMASLAPLAS RGDGLNPLEQ AAGPLLAMLT RLRSTIAHPA PASLRAQLLG YLRQFEEKAR QAGVAADEVM LARYVLCTAL DEAVLSTPWG SASDWGKQSL LITLHNEAWG GEKVFQLLEH CLQNPHQRLH LLELLYLCTS LGFEGRYRVM HDGRSQLETL RERTAAVIRS TRGEYERELS PHWRGLSVMR DRLSQYLPPW VGIAIGLALL LALLFGLRMK LAADAEPVFR RIHAIGEIPV QAIDRPAIQP RVIERPRLAR FLAEDIKAQR VAVEDAVDRS VVTIRGDELF ASASASVRDE FQPLLLRIAD ALRKVKGQVL VTGHSDNRPI ATLRYPSNWK LSQARAQEVA DLLGATTGEA GRFTAEGRSD TEPVATNASA EGRARNRRVE ITVFAEGAQ
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