Gene PSPA7_0149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_0149 
Symbol 
ID5355309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp164697 
End bp166046 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content72% 
IMG OID640809203 
Producthypothetical protein 
Protein accessionYP_001345545 
Protein GI152985769 
COG category[M] Cell wall/membrane/envelope biogenesis
[S] Function unknown 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
[COG3455] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03349] type IV / VI secretion system protein, DotU family
[TIGR03350] type VI secretion system OmpA/MotB family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0371837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCCCA TCGACGATCC CTTCGGCACC CCGGCCGGCG GTGGCAACGG AAGCCCGCCC 
GACGACCGCA CCATGATCAT GCCGCGCCCC GGCGGTCGCG CGCCGGAACC GGCCAGCGGC
CCCCGCGCCG GCGACCCCTA CACGCCGCCG CCGATGGCCA GCCTGGCACC GCTGGCCAGC
CGGGGCGACG GCCTCAACCC GCTGGAGCAG GCCGCCGGCC CGCTGCTGGC GATGCTCACC
CGCCTGCGCA GCACCATCGC CCACCCGGCG CCGGCCAGCC TGCGCGCACA GCTGCTCGGC
TACCTGCGCC AGTTCGAGGA GAAGGCGCGC CAGGCCGGGG TCGCCGCGGA CGAAGTGATG
CTGGCGCGCT ACGTGCTCTG CACCGCCCTC GACGAAGCGG TGCTCAGCAC GCCCTGGGGC
AGCGCCAGCG ACTGGGGCAA GCAGAGCCTG TTGATCACCC TGCACAACGA GGCCTGGGGC
GGCGAGAAGG TCTTCCAGCT GCTCGAGCAC TGCCTGCAGA ACCCGCACCA GCGCCTGCAT
CTGCTGGAGC TGCTGTACCT GTGCACCAGC CTCGGCTTCG AAGGCCGCTA CCGGGTCATG
CACGACGGCC GCAGCCAGCT GGAGACACTG CGCGAGCGCA CCGCGGCGGT GATCCGCAGC
ACCCGCGGCG AATACGAGCG CGAGCTGTCG CCGCACTGGC GCGGCCTCAG CGTGATGCGC
GACCGCCTTT CGCAATACCT GCCGCCGTGG GTCGGCATCG CCATCGGCCT GGCCCTGCTG
CTGGCCCTGC TGTTCGGCCT GCGGATGAAG CTGGCCGCCG ACGCCGAGCC GGTGTTCAGG
CGCATCCACG CCATCGGCGA GATCCCGGTA CAGGCCATCG ACCGCCCGGC GATCCAGCCG
CGGGTGATCG AGCGGCCGCG CCTGGCGCGC TTCCTCGCCG AGGACATCAA GGCCCAGCGG
GTGGCGGTGG AAGACGCCGT CGATCGCTCG GTGGTGACCA TCCGCGGCGA CGAGCTGTTC
GCCAGCGCCA GCGCCAGCGT GCGCGACGAG TTCCAGCCGC TGCTGCTGCG CATCGCCGAC
GCCCTGCGCA AGGTCAAGGG CCAGGTGCTG GTCACCGGCC ATAGCGACAA CCGGCCGATC
GCCACGCTGC GCTACCCGTC CAACTGGAAA CTGTCCCAGG CCCGCGCCCA GGAGGTCGCC
GACCTGCTCG GCGCGACCAC CGGCGAAGCC GGCCGCTTCA CCGCCGAAGG GCGCAGCGAC
ACCGAGCCGG TGGCGACCAA TGCCAGCGCC GAAGGCCGCG CACGCAACCG CCGGGTGGAA
ATCACCGTAT TCGCGGAGGG TGCGCAATGA
 
Protein sequence
MSPIDDPFGT PAGGGNGSPP DDRTMIMPRP GGRAPEPASG PRAGDPYTPP PMASLAPLAS 
RGDGLNPLEQ AAGPLLAMLT RLRSTIAHPA PASLRAQLLG YLRQFEEKAR QAGVAADEVM
LARYVLCTAL DEAVLSTPWG SASDWGKQSL LITLHNEAWG GEKVFQLLEH CLQNPHQRLH
LLELLYLCTS LGFEGRYRVM HDGRSQLETL RERTAAVIRS TRGEYERELS PHWRGLSVMR
DRLSQYLPPW VGIAIGLALL LALLFGLRMK LAADAEPVFR RIHAIGEIPV QAIDRPAIQP
RVIERPRLAR FLAEDIKAQR VAVEDAVDRS VVTIRGDELF ASASASVRDE FQPLLLRIAD
ALRKVKGQVL VTGHSDNRPI ATLRYPSNWK LSQARAQEVA DLLGATTGEA GRFTAEGRSD
TEPVATNASA EGRARNRRVE ITVFAEGAQ