Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0147 |
Symbol | |
ID | 5359537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 160493 |
End bp | 161173 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640809201 |
Product | hypothetical protein |
Protein accession | YP_001345543 |
Protein GI | 152987384 |
COG category | [S] Function unknown |
COG ID | [COG3913] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03373] type VI secretion-associated protein, BMA_A0400 family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACAGCG TCGGTTTCTA CGGCAAGCTG GCCGGCCGCG GCGACTTCGT CAGCCGCGGC CTGCCGAACA CCTTCGTCGA GCCCTGGGAC GCCTGGCTGG CCAGCGGCAT GCGCGCCAGC CAGGACGAAC TCGGCGCGGC CTGGCTCGAC GCCTACCTGA CCAGCCCGCT GTGGCGCTTC GCCATCGCCC CCGGCCTGCT CGGCGACGAT GCGGTGGCCG GAGTGGTGAT GCCGAGCATC GACCGGGTCG GCCGCTACTT CCCGCTCACC GTGGCCTGCC TGCTGCCGGC GAACGCCGAC CTCGGCGCGC TGGTCGGCGG CGACGACGGC TGGTTCGAGC AGGTCGAGGG CCTGCTGCTC TCCACCCTCG AACCGGAAGC CGAGGTCGAA GCCTTCGAGC AGGCGGTGGC GCAGCTCCCG GCGCCGCCCT GCGGCCCGCG CATCGAGCAG TCGCTGATCA GCGGCAACCT GCTGCGCAGC GAGGCGGCGA CCCCGGCACA GCGCCTCGCC GCCCTGGCCC AGCACGCCTG CGACGGCGCC AGCCACTGGT GGGGCCGCGG CTCGGCGCGG ATTTCCGCAG GCCTGATGCG CTACCAGGGA CTGCCGCCGG CGCCGGCGTT CGGACGATTT CTCACCGGCG AGGGCGAGGT GATCCCGCTC TTTCCCGGCA TACCCGGTTA A
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Protein sequence | MNSVGFYGKL AGRGDFVSRG LPNTFVEPWD AWLASGMRAS QDELGAAWLD AYLTSPLWRF AIAPGLLGDD AVAGVVMPSI DRVGRYFPLT VACLLPANAD LGALVGGDDG WFEQVEGLLL STLEPEAEVE AFEQAVAQLP APPCGPRIEQ SLISGNLLRS EAATPAQRLA ALAQHACDGA SHWWGRGSAR ISAGLMRYQG LPPAPAFGRF LTGEGEVIPL FPGIPG
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