Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0048 |
Symbol | |
ID | 5354877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 58884 |
End bp | 59570 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640809102 |
Product | putative lipoprotein |
Protein accession | YP_001345444 |
Protein GI | 152988492 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1462] Uncharacterized protein involved in formation of curli polymers |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCATC GCGCCAAGAA AGCACTACTG CCGCTCCTCG CCGCCGCCAC CCTGGCCGGC CTGGCGGGCT GCGCCACCGA GACCTCCACC GCGTTGCCGG TACAGCAGGT CGAGAGCGTC AACCGACCCT ACAGCGGCGT GCGTTCGCCG ATCGCGGTGG GCAAGTTCGA CAACCGCTCC AGCTACATGC GCGGGATCTT TTCCGATGGC GTCGACCGCC TCGGCGGCCA GGCCAAGACC ATTCTCATCA CCCACCTGCA GCAGACCAAT CGCTTCAACG TGCTGGACCG CGACAACATG AGCGAGATCC AGCAGGAAGC GGCGATCAAG GGCCAGGCCC AGCGCCTGAA GGGTGCCGAC TACGTGGTGA CCGGCGACGT CACCGAGTTC GGCCGCAAGG AAGTCGGCGA CCGCCAGCTG TTCGGCATCC TCGGCCGCGG CAAGTCGCAG ATCGCCTACG CCAAGGTGGC GCTGAACATC GTCAACATCT CTACCTCGGA GGTCGTCTAT TCGACCCAGG GCGCTGGCGA GTACGCCCTG TCCAACCGCG AGGTGATCGG CTTCGGCGGC ACCGCCAGCT ACGACTCGAC CCTCAACGGC AAGGTCCTCG ACCTGGCCAT GCGCGAGGCG GTGAACAAGT TGGTCAACGC GGTCGATAGC GGCGCCTGGA AGCCACAGAA CCAATAA
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Protein sequence | MSHRAKKALL PLLAAATLAG LAGCATETST ALPVQQVESV NRPYSGVRSP IAVGKFDNRS SYMRGIFSDG VDRLGGQAKT ILITHLQQTN RFNVLDRDNM SEIQQEAAIK GQAQRLKGAD YVVTGDVTEF GRKEVGDRQL FGILGRGKSQ IAYAKVALNI VNISTSEVVY STQGAGEYAL SNREVIGFGG TASYDSTLNG KVLDLAMREA VNKLVNAVDS GAWKPQNQ
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