Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0025 |
Symbol | hemF |
ID | 5354213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 25614 |
End bp | 26531 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640809079 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_001345421 |
Protein GI | 152983988 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0408] Coproporphyrinogen III oxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGACC GTATCGCCGC TGTCAAAACC TATCTGCTCG ACCTGCAAGA CCGCATCTGC GCCGCCCTCG AGGCGGAAGA CGGCAAGGCC CGCTTCGCCG AGGATGCCTG GGAGCGTCCG GCCGGCGGCG GCGGACGCAC GCGGGTGATC GGCGACGGCG CGCTGATCGA GAAAGGCGGG GTGAACTTCT CCCACGTGTT CGGCGACAGC CTGCCGCCCT CGGCCAGCGC CCACCGCCCG GAACTCGCCG GGCGCGGTTT CCAGGCGCTG GGCGTGTCGC TGGTGATCCA CCCGGAGAAC CCCCACGTAC CGACCTCCCA CGCCAACGTG CGCTTCTTCT GCGCCGAGAA GGCAGGCGAG GAGCCGGTCT GGTGGTTCGG CGGCGGCTTC GACCTGACCC CCTACTATGC GAGCGAGGAA GACTGCGTGC ATTGGCACCG GGTCGCCCGC GACGCCTGCG CGCCGTTCGG CGCGGACGTC TACCCGCGCT ACAAGGAATG GTGCGACCGC TACTTCCACC TCAAGCACCG CAACGAACCG CGCGGTATCG GCGGGCTGTT CTTCGACGAC CTCAACCAGT GGGACTTCGA TACCTGCTTC GCCTTCATCC GCGCCATCGG TGACGCCTAC ATCGACGCCT ATCTGCCGAT CGTCCAGCGT CGCAAGCACA CCCCGTTCGA CGAGCGGCAA CGCGAGTTCC AGGCCTATCG CCGGGGCCGC TACGTCGAGT TCAACCTGGT GTTCGACCGT GGCACCCTGT TCGGCCTGCA GTCCGGCGGC CGTACCGAGT CGATCCTCAT GTCGCTGCCG CCGCAGGTAC GCTGGGGCTA TGACTGGAAA CCCGAGCCGG GCAGCGAGGA AGCGCGCCTG ACCGAGTACT TCCTCACCGA CCGCGACTGG CTCGCCGGCC AGCCCTGA
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Protein sequence | MTDRIAAVKT YLLDLQDRIC AALEAEDGKA RFAEDAWERP AGGGGRTRVI GDGALIEKGG VNFSHVFGDS LPPSASAHRP ELAGRGFQAL GVSLVIHPEN PHVPTSHANV RFFCAEKAGE EPVWWFGGGF DLTPYYASEE DCVHWHRVAR DACAPFGADV YPRYKEWCDR YFHLKHRNEP RGIGGLFFDD LNQWDFDTCF AFIRAIGDAY IDAYLPIVQR RKHTPFDERQ REFQAYRRGR YVEFNLVFDR GTLFGLQSGG RTESILMSLP PQVRWGYDWK PEPGSEEARL TEYFLTDRDW LAGQP
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