Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0021 |
Symbol | |
ID | 5355130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 21589 |
End bp | 22614 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640809075 |
Product | hypothetical protein |
Protein accession | YP_001345417 |
Protein GI | 152985066 |
COG category | [S] Function unknown |
COG ID | [COG1652] Uncharacterized protein containing LysM domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.156222 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGAAAT CACTAGTCGC CCTTCTGCTC CTTGCCGCGA GCGGTCTGGC GCAGGCCCAG GTCGACCTCA GGGAAGGGCA TCCGGACCGC TACACGGTGG TCAGGGGCGA TACCCTGTGG GACATCTCGG GGAAATTCCT CCGCCAGCCG TGGAAGTGGC CGCAGCTCTG GCACGCCAAC CCGCAGATCC AGAATCCCCA CCTGATCTAC CCCGGCGACA CCCTCAGCCT GGTCTACATC GATGGCCAGC CGCGCCTGGT GCTGAACCGT GGAGAGTCGC GCGGCACCAT CAAGCTTTCG CCGAAGATCC GCAGCACGCC GATCGCCGAG GCGATCCCGA CCATCCCGCT GGACAAGATC AACAGCTTCC TGCTGGCCAA TCGCATCGTC GATGACGAGA AGACCTTCAC CGCTGCGCCG TACATCGTCG CCGGCAACGC CGAGCGGATC GTCAGCGGTA CCGGCGACCG CGTCTACGCC CGCGGCAAGT TCGCCGACGG CCAGCCGGCC TATGGCATCT TCCGCCAGGG CAAGGTCTAC GTCGATCCGA AGACCAAGGA AGTCCTCGGC ATCAACGCCG ACGACATCGG CGGCGGCGAG GTGGTGGCCA CCGAGGGCGA CGTCGCCACC CTGGCGCTGA CCCGCACCAC CCAGGAAGTG CGCCTGGGCG ACCGCCTGTT CCCCACCGAG GAGCGTGCGG TGAACTCCAC CTTCATGCCC GGCGAGCCGA GCCGCGAGGT GAAGGGCGAG ATCATCGACG TGCCGCGCGG CGTGACCCAG ATCGGCCAGT TCGACGTGGT GACCCTGAAC CGTGGGCTGC GCGACGGCCT CGCCGAAGGC AACGTGCTGG CCATCTACAA GGTCGGCGAG ACGGTGCGCG ATCGCGTCAC CGGGGAGTCG GTGAAGATCC CCGACGAGCG CGCCGGCCTG CTGATGGTGT TCCGCACCTA CCAGAAGCTG AGCTACGCCC TGGTGCTGAT GGCCAGCAGG CCCCTCTCGG TCACCGACAG GGTGCAGAAC CCCTGA
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Protein sequence | MRKSLVALLL LAASGLAQAQ VDLREGHPDR YTVVRGDTLW DISGKFLRQP WKWPQLWHAN PQIQNPHLIY PGDTLSLVYI DGQPRLVLNR GESRGTIKLS PKIRSTPIAE AIPTIPLDKI NSFLLANRIV DDEKTFTAAP YIVAGNAERI VSGTGDRVYA RGKFADGQPA YGIFRQGKVY VDPKTKEVLG INADDIGGGE VVATEGDVAT LALTRTTQEV RLGDRLFPTE ERAVNSTFMP GEPSREVKGE IIDVPRGVTQ IGQFDVVTLN RGLRDGLAEG NVLAIYKVGE TVRDRVTGES VKIPDERAGL LMVFRTYQKL SYALVLMASR PLSVTDRVQN P
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