Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_4479 |
Symbol | |
ID | 5367200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 5091572 |
End bp | 5092261 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640806885 |
Product | two component transcriptional regulator |
Protein accession | YP_001343309 |
Protein GI | 152998474 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.874583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000000145831 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCTCTT ATAAAATCTT GGTGGTCGAC GACGAGCCTC AAATCCATAC CTTCATTCGA ATTTCATTAG CAGCAGAAGG TTTTGAGTAC CTTGGTGCGG AATCCATCGC CGCTGCAAAG CACGTGATTG AACAAGATTC ACCGCATTTG TTGGTATTGG ATCTAGGTTT GCCTGACGGC GACGGCATGG ATTTGGTCAA ATATGTGCGA GCCACCAGCA ACACACCTAT TTTGATTCTG ACTGCTCGGG ATGAAGAAGA TGAAAAGATT CGCCTGCTTG AAGCGGGCGC GAATGATTAC CTGAGCAAAC CCTTCGGCAT TCGAGAATTA ATTGTTCGAG TGAAAGTCTT GTTACGGGAT TTAGTGAATA CCCACTCACC GGTAGATGTC CTTGAAACCC AAGATATTAA GTTGGAAATC AGCACCAATC AGGCTTGGTT GCAAGGTTCC CCTTTGGCGC TAACTAAGAA GGAATTCGCC TTTTTACGCA TGCTGATGAC CACGCCAGAC AAGCTGGTGA TGCAAGAAGA GTTACTGGTC AAAATTTGGG GCGTGACTCA TACCCGGGAC TCGCATTATT TACGGATTTT AGTTAGCCAG TTGCGTAAGA AACTCAATGA TAATGCCAAT GATCAGCGTG TTATCAAAAC GGAACCTGGT CTGGGTTATC GGTTGTTATC CGATCGTTAA
|
Protein sequence | MTSYKILVVD DEPQIHTFIR ISLAAEGFEY LGAESIAAAK HVIEQDSPHL LVLDLGLPDG DGMDLVKYVR ATSNTPILIL TARDEEDEKI RLLEAGANDY LSKPFGIREL IVRVKVLLRD LVNTHSPVDV LETQDIKLEI STNQAWLQGS PLALTKKEFA FLRMLMTTPD KLVMQEELLV KIWGVTHTRD SHYLRILVSQ LRKKLNDNAN DQRVIKTEPG LGYRLLSDR
|
| |