Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_4456 |
Symbol | |
ID | 5368856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 5068488 |
End bp | 5069411 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640806862 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001343286 |
Protein GI | 152998451 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.30112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0000547502 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGAACT TTTTAATGAA ACGATTTCTG CAAGCAGTAT TTGTACTACT TGCAGTCACC TTAATCGTTG CTTTTGCTAT ACGTTTAACA GGAGATCCAG CTTTGATGCT GACTCAAGGT GCAGGTAGTG TGACCGAAGC CGATCTGATG TTAATTCGAG AAGCACTAGG CATCAATAAG CCCTTTTTTG TTCAGTATTT TGAGTTTCTT AAAGGCTTAT TTAGCTTCGA TTTTGGTCGT AGTTTCATGG GTGGAACGCC AGTATCGGAA CTTATCAGCA AATCCTTACC AGCAACGCTA ATGCTTGCAG CATCCGTTAT GTTTGTGTCT ATCGCTATTT CCATTCCCCT AGGTATCAAA GCTGCTGTAT CAAAAGGTAA ATGGGCTGAT CAAACCATAC GCATCTTGTC ATTAATTGGT CTGTCATTTC CAAACTTTTG GTTAGGACTT ATGTTGGTCT TGGTATTTTC TATTTGGCTG CAGTGGTTAC CACCAAGTGG TATGGATGGC TTTACTAGCT TCTTAATGCC AGCTATTACA ATGGCGATTA TTCTGACCGC AACCAATGTT CGTCTGGTTC GCTCGTCTAT GCTTGAAACC CTTCAAGCAC AATACATAAT GGTCGCTAGA GCAAAAGGTC TTAGCGAAAA CAAAGTGCTC TATAAACACG CTTTGCGTAA TTGTGCGATT CCACTGATTA CCTACTTTGG TCTGCAATTC GGTGGGCTAT TAGGCGGGAT AGTCATTATT GAACGCGTCT TCAATTGGCC AGGTCTTGGC ACTCTTGCCT TCGATGCAGT AAGTGGCCGT GACTATCCAG TACTGCAAGC CGTTATCACC ATCCTCTCCA TGCTTATCGT GAGCGTTAAC CTGTTGGTTG ATATTGCGTA TGGCTTGATC GATCCACGCA TTCGTACGGA GTAA
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Protein sequence | MANFLMKRFL QAVFVLLAVT LIVAFAIRLT GDPALMLTQG AGSVTEADLM LIREALGINK PFFVQYFEFL KGLFSFDFGR SFMGGTPVSE LISKSLPATL MLAASVMFVS IAISIPLGIK AAVSKGKWAD QTIRILSLIG LSFPNFWLGL MLVLVFSIWL QWLPPSGMDG FTSFLMPAIT MAIILTATNV RLVRSSMLET LQAQYIMVAR AKGLSENKVL YKHALRNCAI PLITYFGLQF GGLLGGIVII ERVFNWPGLG TLAFDAVSGR DYPVLQAVIT ILSMLIVSVN LLVDIAYGLI DPRIRTE
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