| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_4455 |
|---|
| Symbol | |
|---|
| ID | 5365019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 5066865 |
|---|
| End bp | 5068394 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640806861 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001343285 |
|---|
| Protein GI | 152998450 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.661138 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.000234808 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGTA AAAAATCATT AGGGACGGTA TTAAAAACCC TAGCCATTAC CAGCAGCTTA
ACCGCTGCAA GTTTAAGCTT TGCCAATACA TTAACCGTAT CTTCACCACA AGATCCGGGA
AGTTGGGACC CAATCGACAC ATTTTTAGTT AATTGGGCTT CCGTCGCAAC CAATATCTAT
GATGGTTTAA CCTATCGTGG TCCAGACCTA AAATTACAAC CAGGACTTGC TACCTCTTGG
AAGCAGTTGG ATGACGGAAA GCGTATTCGT TTTACATTAC GCCAAGGTGT TAAATTCCAT
GATGGCGAAG ACTTTAATGC TGCAGCCGTG AAATTTACTT TTGATCGCTT AATGGGTGAT
GAAGGTAAAA AAGGCCCACA GCGTTCTAAT TATTCCGCGA TTGATTCAGT CGAAGTCATT
GATGACTATA CCGTCGACTT CCATCTAAAA GCGGCGGATC CTGTATTACT TACCAAGCTG
GCAGGTTATG GTGCCATGAT AGTGCCGCCA AAATACATTC AAGAAAAAGG TGAAGACTTT
TTCAATACGC ATCCGGTTGG CACTGGGCCA TTTAAATTTG CTTCTTACGA GCCAAAAGTC
GGTATCAAAC TAGAGGCCTA CACGGACCAT TGGGGTGGCG CGCCGAAATT AACAAACCTC
AATTATCGCT TTATCAGCGA ACCGTCTACG GCGGTTGCCG AGCTGCAATC TGGACGCGTT
GATTTGGTCA TTCCGCCAAC CATTCCAATT GGAATGATTA CCACGATTGA AAAAGATCCA
AATCTTAAAG TGGCTACCAC CATCAGCCCT ACGGTATACG CATTACGTTT CAATACTAAA
AATGGCATTA CCAAAGACGA AAAAGTCCGT AAAGCATTGA TTTATGGTGT AGATCGTCAG
GCAATCATTG ATTCCATTTT AGGTGGCCAA GCAGCTCAAA TTGCTAGTTT CCAAAGTGCT
ATTTCATTTG GTGACGATCC ATCCATGAAG CCGCTGCCTT ATGATCCAAA CAAAGCCATG
CAGCTTCTTA AAGAAGCAGG CATTAAACCT GGCACCAAGA TTCAAATCGA TATCCGTGGT
AATGACGCCA CATTTAATGA AGTCTCCCAA GCCGTTGCCA GCTATCTACA AATTGTCGGT
CTAAACGCCA CGATTAAACC TTATGAAACC AACGTGCTGC TCAATGACAT TATTCCTGCA
GGTAAGACAG GCGAAATGTT CCAACAATCT TGGGGTGGAT GGACACTGGA TTACGACAAT
ACAGCGTATT TCATGTACCA CACAGGCGAA AAGTGGAATC CATACGACAG CGATCCAACG
CTAGACAAAC AATTAGAGTC TCAACGCTCT ATTACAGATC ATGCTAAGCG AGAAGAGATA
CTGCAGTCTA TTGCTAACTA CACGGCAAAC CGCGCCTTGG AAATGCCACT GTACAACTTA
AATGCTATTT TCGGTGTGTC TAAAAGAGTG AAGAAGTTTA CTCCTGTACC CGATAGTCGT
TTGCGCTTAA CCGATGTAAC TGTCGAATAA
|
|---|
| Protein sequence | MNSKKSLGTV LKTLAITSSL TAASLSFANT LTVSSPQDPG SWDPIDTFLV NWASVATNIY
DGLTYRGPDL KLQPGLATSW KQLDDGKRIR FTLRQGVKFH DGEDFNAAAV KFTFDRLMGD
EGKKGPQRSN YSAIDSVEVI DDYTVDFHLK AADPVLLTKL AGYGAMIVPP KYIQEKGEDF
FNTHPVGTGP FKFASYEPKV GIKLEAYTDH WGGAPKLTNL NYRFISEPST AVAELQSGRV
DLVIPPTIPI GMITTIEKDP NLKVATTISP TVYALRFNTK NGITKDEKVR KALIYGVDRQ
AIIDSILGGQ AAQIASFQSA ISFGDDPSMK PLPYDPNKAM QLLKEAGIKP GTKIQIDIRG
NDATFNEVSQ AVASYLQIVG LNATIKPYET NVLLNDIIPA GKTGEMFQQS WGGWTLDYDN
TAYFMYHTGE KWNPYDSDPT LDKQLESQRS ITDHAKREEI LQSIANYTAN RALEMPLYNL
NAIFGVSKRV KKFTPVPDSR LRLTDVTVE
|
|---|
| |