Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_4428 |
Symbol | |
ID | 5367948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 5033054 |
End bp | 5036176 |
Gene Length | 3123 bp |
Protein Length | 1040 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640806834 |
Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_001343258 |
Protein GI | 152998423 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTAAAG CGATTGAGGT GTTACAACCT AACTTCATTC AGCGTCCACT CAATGAATTG TGGCAGCTGA TTTCCCCTCT TTATAATATG GATGAAGAGA AGTGGTTAAA TGAGCTTTTA CCTTTAGCAA AACCGACTGA AGGAGAACTC GAAAACCAAA CCAATGCCGC GGCAAACTTA ATTGCTGAAG TTCGTAAAGA CGACGACAGC ATGTCAATGA TTGACGCTTT ATTATTGGAA TACAGCTTAG ACACCAAAGA AGGCATTTTG CTGATGTGTT TGGCCGAAGC ACTTATGCGT GTACCAGACA AGGAAACAGC CGATGCTTTC ATCAAGGACC GTTTGAGCGT TGCCGATTGG GCATCTCACG CTAAAAACTC GGATTCTTTC TTCGTTAATG CTTCTACTTG GGGCCTATTG TTGACGGGTA AAATCGTCAC GATGGACGAG AAAAAAGACG GTACGCCAGC TAACTTGGTT AACCGTATGG TAAACCGTGT TTCTGAGCCG GTGATTCGTA AAGCGATGAA CCAAGCGATG AAAATCATGG GACACCAGTT TGTTCTAGGC CGCAGCATCG AAGAAGCTTT GTCTCGTGGC AAAAGCTACC GTGACAAAGG TTACACCTAT TCTTTCGACA TGTTGGGTGA AGCCGCATTA ACTGCAGCTG ACGCAGACAA ATACCTAACG TCTTATATGA AAGCGGTCGA ATCTGTTGGC AAAGACACTT ATAGTCAAAA ACATCGACCG ACCATTTCTA TCAAGTTATC TGCGCTACAC CCGCGTTATG ACGTGGGTTG TGAAGAACGC GTAATGACAG AACTGTTCGA CAGCGTTAAA GGCTTAATTA TCAAAGCTCG CTCGTTAAAT GTTGGCATTA CTATAGATGC AGAAGAAGCT GATCGCTTAG AACTGTCATT GCATTTGTTT GAAAAACTAT TCCGTGATGA ATGCACCAAA GGCTGGGGCT TATTTGGCCT TGTGGTTCAG GCTTATTCAA AACGCGCTCT GCCGGTTTTG GTTTGGTTGG CAGCACTATC TAAAGAGCAA GGCGACCGCA TCCCTGTGCG TCTAGTGAAA GGCGCTTACT GGGATTCTGA GATCAAGCTT TGCCAACAAC GCGGTATCAA TGGTTACCCT GTTTACACTC GCAAAGAGTC AACAGACGTT TCTTACTTGG CTTGCGCTCA CTTTTTACTG AGCGAACACA CTCGTGCGAA TATCTTCCCG CAGTTTGCCA GCCATAACGC ACACACTATC GCGACGATTA GCTGTTTAGC TAAGCAATTA GGCGCGACAA CACAAGAATT TGAATTCCAA CGTCTACACG GTATGGGCGA TGCCCTTTAC AACCGTTTGA TCAAAGGCAG CGACATCTGC GTACGTATTT ACGCGCCGGT AGGTAGCCAT AAAGACTTAC TTCCATACTT GGTTCGTCGT CTACTCGAAA ACGGCGCGAA CAGCTCATTC GTTCACCGTT TGATTGATGC CAGCTACCCA ATTGCCGATT TGATTAATCA CCCAGTCACG ACTCTTGAAA GCCGTAAATC ATTGGCGAAT CCGCATATCA ACTTGCCAGC CAACTTGTTT GACGACCGTA AAAACTCTTT TGGTCCGAAC ATCGAAATTG AATCTGATTG GACGCCTTTC AAAGCTAAAG TTGATGCCTT TATGGGACAA AATACCCAGT GGCGTGCTTT CCCTATCGTT GGTGGTGAGA AAGTAGCAAC AGGTCAAACG CATTCTATTG AAAGCCCATA CGATCACAGC CAAACAGCTG GGCAAATTGA TTGGGCAGAC GCAGCAACCG TCACCAAAGC AATCGATCTT GCCGAAGCTG CTTTCCCTGC ATGGTCAGCG CGCCCAGCGA CAGAACGTGC TGATTGCCTA GATAAAATGG CTGACTTGAT GGAAGAAAAC TATGCGGAAT TAATGGCCCT TTGCCACCGT GAAGCAGGTA AAACCATTCA GGACAGTATC GACGAAGTTC GTGAAGCGGT GGATTTCTGT CGCTATTATG CGCAACAAGC TCGTAGCCAC TTTGCTAACC CAACACATTA CACGGATTTC TTAGGCAATG AAAAACAAGC TAAGCTAAAC GGCCGTGGCG TATTTACTTG TATCAGCCCT TGGAACTTCC CATTGGCAAT CTTTACAGGC CAAGTGGTTG CCGCTCTTGT AGTTGGTAAC ACAGTGGTTG CGAAACCGGC TGAGCAAACT AGTTTAATCG CTTTCCGTGC CATCGAAATG CTCCATCAGG CAGGCGTTCC AACAGACGTT CTTCACTTGT TACCAGGTGA CGGCGCGACG GTTGGTGCTC CACTTACTAG CGACAAACGC ATTGCTGGTC TTGCCTTCAC AGGTTCCACT GGCACAGCAC AATTGATCAA CCGCACGTTA GCAGCTCGTG GCGTGGCACC TGTGCCAGTA ATTGCGGAAA CCGGTGGTCA AAACGCTATG TTGGTTGATT CAACCTCTTT ACCTGAGCAA GTGGTTCGCG ATGCAGTTCG TTCGGCGTTT GCGTCTGCTG GACAGCGTTG TTCTGCATTA CGCGTATTGT TCGTGCAAGC TGACATCGCC GATCGTGTTA TTCCGATGAT CAAAGGTGCC ATGGCTGAAC AAAGCGTTGG CTTGCCTTAT CTACACAGCA CAGATGTAGG TCCAGTTATC GATAAAAAAG CACAGAAAAT GTTGCTAGAT CATATCGAAT ACATGAAAGC GGAAAGTAAA TTGATCGCTC AAACGGAGCT ACCAGATTTC GCTAAAAACG GTACCTTCGT GGCGCCAACA GCGTTTGAAA TTGCCAGCAT TGATCAGCTA ACAGATGAGA AGTTTGGCCC TATCCTTCAC GTTGTACGTT ACAAAGCACG TGACTTAGAT AAGATCATCG ATACTATCAA TAACTCAGGC TTTGGTTTGA CTATGGGTGT TCACAGCCGT AACGAAACCA CTTGTGCACG CATTGCTAGT CGCGCTCGTG TTGGCAACCT TTACATTAAC CGCGACCAAG TCGGTGCGGT AGTTGGCGTT CAGCCTTTCG GCGGACAAGG TTTATCCGGC ACAGGGCCAA AAGCTGGCGG TCCACATTAC CTTCAACGCT TCGCTATTGA GCAAGACCTT TAA
|
Protein sequence | MFKAIEVLQP NFIQRPLNEL WQLISPLYNM DEEKWLNELL PLAKPTEGEL ENQTNAAANL IAEVRKDDDS MSMIDALLLE YSLDTKEGIL LMCLAEALMR VPDKETADAF IKDRLSVADW ASHAKNSDSF FVNASTWGLL LTGKIVTMDE KKDGTPANLV NRMVNRVSEP VIRKAMNQAM KIMGHQFVLG RSIEEALSRG KSYRDKGYTY SFDMLGEAAL TAADADKYLT SYMKAVESVG KDTYSQKHRP TISIKLSALH PRYDVGCEER VMTELFDSVK GLIIKARSLN VGITIDAEEA DRLELSLHLF EKLFRDECTK GWGLFGLVVQ AYSKRALPVL VWLAALSKEQ GDRIPVRLVK GAYWDSEIKL CQQRGINGYP VYTRKESTDV SYLACAHFLL SEHTRANIFP QFASHNAHTI ATISCLAKQL GATTQEFEFQ RLHGMGDALY NRLIKGSDIC VRIYAPVGSH KDLLPYLVRR LLENGANSSF VHRLIDASYP IADLINHPVT TLESRKSLAN PHINLPANLF DDRKNSFGPN IEIESDWTPF KAKVDAFMGQ NTQWRAFPIV GGEKVATGQT HSIESPYDHS QTAGQIDWAD AATVTKAIDL AEAAFPAWSA RPATERADCL DKMADLMEEN YAELMALCHR EAGKTIQDSI DEVREAVDFC RYYAQQARSH FANPTHYTDF LGNEKQAKLN GRGVFTCISP WNFPLAIFTG QVVAALVVGN TVVAKPAEQT SLIAFRAIEM LHQAGVPTDV LHLLPGDGAT VGAPLTSDKR IAGLAFTGST GTAQLINRTL AARGVAPVPV IAETGGQNAM LVDSTSLPEQ VVRDAVRSAF ASAGQRCSAL RVLFVQADIA DRVIPMIKGA MAEQSVGLPY LHSTDVGPVI DKKAQKMLLD HIEYMKAESK LIAQTELPDF AKNGTFVAPT AFEIASIDQL TDEKFGPILH VVRYKARDLD KIIDTINNSG FGLTMGVHSR NETTCARIAS RARVGNLYIN RDQVGAVVGV QPFGGQGLSG TGPKAGGPHY LQRFAIEQDL
|
| |